Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-3Q5R1E6 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-3Q5R1E6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Gm11539-201ENSMUST00000119837 557 ntBASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-3Q5R1E6 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-3Q5R1E6 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav6-3Q5R1E6 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav6-3Q5R1E6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-3Q5R1E6 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-3Q5R1E6 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-3Q5R1E6 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-3Q5R1E6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-3Q5R1E6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-3Q5R1E6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-3Q5R1E6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-3Q5R1E6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav6-3Q5R1E6 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.17□□□□□ -0.3
Trav6-3Q5R1E6 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.17□□□□□ -0.3
Trav6-3Q5R1E6 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav6-3Q5R1E6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Trav6-3Q5R1E6 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Trav6-3Q5R1E6 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav6-3Q5R1E6 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-3Q5R1E6 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-3Q5R1E6 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-3Q5R1E6 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-3Q5R1E6 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-3Q5R1E6 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-3Q5R1E6 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-3Q5R1E6 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-3Q5R1E6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-3Q5R1E6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav6-3Q5R1E6 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-3Q5R1E6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-3Q5R1E6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-3Q5R1E6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-3Q5R1E6 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.16□□□□□ -0.3
Trav6-3Q5R1E6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-3Q5R1E6 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-3Q5R1E6 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-3Q5R1E6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-3Q5R1E6 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-3Q5R1E6 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav6-3Q5R1E6 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-3Q5R1E6 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-3Q5R1E6 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-3Q5R1E6 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Gm44450-201ENSMUST00000199528 114 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms