Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Gm18025-201ENSMUST00000221733 862 ntBASIC12.82□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.82□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.82□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Gm44672-201ENSMUST00000206944 1098 ntBASIC12.81□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.81□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.81□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.81□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.8□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.8□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms