Protein–RNA interactions for Protein: Q5R1A4

Trdv2-2, T cell receptor delta variable 2-2 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-2Q5R1A4 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trdv2-2Q5R1A4 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trdv2-2Q5R1A4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trdv2-2Q5R1A4 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trdv2-2Q5R1A4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trdv2-2Q5R1A4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trdv2-2Q5R1A4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trdv2-2Q5R1A4 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trdv2-2Q5R1A4 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trdv2-2Q5R1A4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trdv2-2Q5R1A4 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trdv2-2Q5R1A4 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trdv2-2Q5R1A4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trdv2-2Q5R1A4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trdv2-2Q5R1A4 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trdv2-2Q5R1A4 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trdv2-2Q5R1A4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trdv2-2Q5R1A4 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trdv2-2Q5R1A4 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trdv2-2Q5R1A4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trdv2-2Q5R1A4 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trdv2-2Q5R1A4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trdv2-2Q5R1A4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trdv2-2Q5R1A4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trdv2-2Q5R1A4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC12.61□□□□□ -0.39
Trdv2-2Q5R1A4 Gm8495-201ENSMUST00000188740 694 ntBASIC12.61□□□□□ -0.39
Trdv2-2Q5R1A4 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trdv2-2Q5R1A4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trdv2-2Q5R1A4 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.61□□□□□ -0.39
Trdv2-2Q5R1A4 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trdv2-2Q5R1A4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trdv2-2Q5R1A4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.61□□□□□ -0.39
Trdv2-2Q5R1A4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Trdv2-2Q5R1A4 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trdv2-2Q5R1A4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trdv2-2Q5R1A4 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trdv2-2Q5R1A4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trdv2-2Q5R1A4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trdv2-2Q5R1A4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trdv2-2Q5R1A4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trdv2-2Q5R1A4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trdv2-2Q5R1A4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdv2-2Q5R1A4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdv2-2Q5R1A4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdv2-2Q5R1A4 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trdv2-2Q5R1A4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdv2-2Q5R1A4 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.59□□□□□ -0.39
Trdv2-2Q5R1A4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdv2-2Q5R1A4 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdv2-2Q5R1A4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trdv2-2Q5R1A4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trdv2-2Q5R1A4 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdv2-2Q5R1A4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.59□□□□□ -0.39
Trdv2-2Q5R1A4 Gm10517-202ENSMUST00000192970 758 ntBASIC12.59□□□□□ -0.39
Trdv2-2Q5R1A4 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.59□□□□□ -0.39
Trdv2-2Q5R1A4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdv2-2Q5R1A4 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdv2-2Q5R1A4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trdv2-2Q5R1A4 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trdv2-2Q5R1A4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdv2-2Q5R1A4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdv2-2Q5R1A4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trdv2-2Q5R1A4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdv2-2Q5R1A4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdv2-2Q5R1A4 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdv2-2Q5R1A4 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trdv2-2Q5R1A4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.58□□□□□ -0.39
Trdv2-2Q5R1A4 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trdv2-2Q5R1A4 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms