Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf43Q5NCP0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.69■□□□□ 0.26
Rnf43Q5NCP0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf43Q5NCP0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf43Q5NCP0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf43Q5NCP0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.68■□□□□ 0.26
Rnf43Q5NCP0 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.68■□□□□ 0.26
Rnf43Q5NCP0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf43Q5NCP0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf43Q5NCP0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf43Q5NCP0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf43Q5NCP0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf43Q5NCP0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf43Q5NCP0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf43Q5NCP0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Rnf43Q5NCP0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.68■□□□□ 0.26
Rnf43Q5NCP0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.68■□□□□ 0.26
Rnf43Q5NCP0 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.68■□□□□ 0.26
Rnf43Q5NCP0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Rnf43Q5NCP0 Gm5364-201ENSMUST00000216789 889 ntBASIC16.68■□□□□ 0.26
Rnf43Q5NCP0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf43Q5NCP0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf43Q5NCP0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rnf43Q5NCP0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rnf43Q5NCP0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf43Q5NCP0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf43Q5NCP0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf43Q5NCP0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf43Q5NCP0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Rnf43Q5NCP0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf43Q5NCP0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.67■□□□□ 0.26
Rnf43Q5NCP0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf43Q5NCP0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf43Q5NCP0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf43Q5NCP0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf43Q5NCP0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf43Q5NCP0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf43Q5NCP0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf43Q5NCP0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf43Q5NCP0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf43Q5NCP0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf43Q5NCP0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf43Q5NCP0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf43Q5NCP0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rnf43Q5NCP0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rnf43Q5NCP0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf43Q5NCP0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf43Q5NCP0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf43Q5NCP0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rnf43Q5NCP0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.66■□□□□ 0.26
Rnf43Q5NCP0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf43Q5NCP0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf43Q5NCP0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.66■□□□□ 0.26
Rnf43Q5NCP0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.66■□□□□ 0.26
Rnf43Q5NCP0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf43Q5NCP0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf43Q5NCP0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf43Q5NCP0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf43Q5NCP0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf43Q5NCP0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf43Q5NCP0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf43Q5NCP0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf43Q5NCP0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf43Q5NCP0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf43Q5NCP0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf43Q5NCP0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf43Q5NCP0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Rnf43Q5NCP0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rnf43Q5NCP0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rnf43Q5NCP0 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.65■□□□□ 0.26
Rnf43Q5NCP0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf43Q5NCP0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf43Q5NCP0 Gm25990-201ENSMUST00000102440 86 ntBASIC16.65■□□□□ 0.26
Rnf43Q5NCP0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf43Q5NCP0 Gm11779-201ENSMUST00000118541 368 ntBASIC16.65■□□□□ 0.26
Rnf43Q5NCP0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.65■□□□□ 0.26
Rnf43Q5NCP0 Gm7230-201ENSMUST00000173026 815 ntBASIC16.65■□□□□ 0.26
Rnf43Q5NCP0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.65■□□□□ 0.26
Rnf43Q5NCP0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.65■□□□□ 0.26
Rnf43Q5NCP0 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.65■□□□□ 0.26
Rnf43Q5NCP0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf43Q5NCP0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf43Q5NCP0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf43Q5NCP0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.65■□□□□ 0.26
Rnf43Q5NCP0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rnf43Q5NCP0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf43Q5NCP0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf43Q5NCP0 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.65■□□□□ 0.26
Rnf43Q5NCP0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf43Q5NCP0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf43Q5NCP0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.64■□□□□ 0.26
Rnf43Q5NCP0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf43Q5NCP0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf43Q5NCP0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf43Q5NCP0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.64■□□□□ 0.25
Rnf43Q5NCP0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rnf43Q5NCP0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rnf43Q5NCP0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf43Q5NCP0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rnf43Q5NCP0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms