Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
Pds5bQ4VA53 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC28.52■■■□□ 2.16
Pds5bQ4VA53 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC28.52■■■□□ 2.16
Pds5bQ4VA53 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC28.52■■■□□ 2.16
Pds5bQ4VA53 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Pds5bQ4VA53 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
Pds5bQ4VA53 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Pds5bQ4VA53 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Pds5bQ4VA53 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Pds5bQ4VA53 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Pds5bQ4VA53 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Pds5bQ4VA53 Nudt18-203ENSMUST00000228768 1578 ntBASIC28.51■■■□□ 2.15
Pds5bQ4VA53 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC28.51■■■□□ 2.15
Pds5bQ4VA53 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC28.51■■■□□ 2.15
Pds5bQ4VA53 Rpph1-201ENSMUST00000175096 319 ntBASIC28.51■■■□□ 2.15
Pds5bQ4VA53 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC28.51■■■□□ 2.15
Pds5bQ4VA53 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Pds5bQ4VA53 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Pds5bQ4VA53 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC28.5■■■□□ 2.15
Pds5bQ4VA53 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Pds5bQ4VA53 Gm14127-201ENSMUST00000117906 678 ntBASIC28.5■■■□□ 2.15
Pds5bQ4VA53 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Pds5bQ4VA53 Gpr146-202ENSMUST00000053120 1040 ntBASIC28.5■■■□□ 2.15
Pds5bQ4VA53 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Pds5bQ4VA53 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC28.49■■■□□ 2.15
Pds5bQ4VA53 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Pds5bQ4VA53 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC28.49■■■□□ 2.15
Pds5bQ4VA53 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
Pds5bQ4VA53 AC159621.2-201ENSMUST00000223519 1326 ntBASIC28.49■■■□□ 2.15
Pds5bQ4VA53 AC119177.1-201ENSMUST00000227647 1332 ntBASIC28.49■■■□□ 2.15
Pds5bQ4VA53 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC28.49■■■□□ 2.15
Pds5bQ4VA53 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Pds5bQ4VA53 Gm27430-201ENSMUST00000184585 107 ntBASIC28.49■■■□□ 2.15
Pds5bQ4VA53 Gm44333-201ENSMUST00000197168 107 ntBASIC28.49■■■□□ 2.15
Pds5bQ4VA53 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Pds5bQ4VA53 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC28.49■■■□□ 2.15
Pds5bQ4VA53 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Pds5bQ4VA53 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Pds5bQ4VA53 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC28.48■■■□□ 2.15
Pds5bQ4VA53 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
Pds5bQ4VA53 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Pds5bQ4VA53 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
Pds5bQ4VA53 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
Pds5bQ4VA53 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Pds5bQ4VA53 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Pds5bQ4VA53 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Pds5bQ4VA53 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC28.47■■■□□ 2.15
Pds5bQ4VA53 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Pds5bQ4VA53 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
Pds5bQ4VA53 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Pds5bQ4VA53 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC28.47■■■□□ 2.15
Pds5bQ4VA53 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC28.47■■■□□ 2.15
Pds5bQ4VA53 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Pds5bQ4VA53 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Pds5bQ4VA53 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Pds5bQ4VA53 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC28.47■■■□□ 2.15
Pds5bQ4VA53 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Pds5bQ4VA53 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Pds5bQ4VA53 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
Pds5bQ4VA53 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Pds5bQ4VA53 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
Pds5bQ4VA53 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Pds5bQ4VA53 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC28.46■■■□□ 2.15
Pds5bQ4VA53 Gm25287-201ENSMUST00000103846 110 ntBASIC28.46■■■□□ 2.15
Pds5bQ4VA53 Gm22918-201ENSMUST00000103855 110 ntBASIC28.46■■■□□ 2.15
Pds5bQ4VA53 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC28.46■■■□□ 2.15
Pds5bQ4VA53 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC28.46■■■□□ 2.15
Pds5bQ4VA53 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
Pds5bQ4VA53 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC28.46■■■□□ 2.15
Pds5bQ4VA53 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Pds5bQ4VA53 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Pds5bQ4VA53 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
Pds5bQ4VA53 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Pds5bQ4VA53 Gm13223-201ENSMUST00000118609 747 ntBASIC28.45■■■□□ 2.15
Pds5bQ4VA53 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Pds5bQ4VA53 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Pds5bQ4VA53 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC28.45■■■□□ 2.15
Pds5bQ4VA53 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC28.45■■■□□ 2.15
Pds5bQ4VA53 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.15
Pds5bQ4VA53 Gm2423-201ENSMUST00000074863 733 ntBASIC28.45■■■□□ 2.15
Pds5bQ4VA53 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Pds5bQ4VA53 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Pds5bQ4VA53 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Pds5bQ4VA53 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Pds5bQ4VA53 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Pds5bQ4VA53 Gm12151-201ENSMUST00000121374 290 ntBASIC28.44■■■□□ 2.14
Pds5bQ4VA53 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC28.44■■■□□ 2.14
Pds5bQ4VA53 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC28.44■■■□□ 2.14
Pds5bQ4VA53 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Pds5bQ4VA53 Gtpbp10-211ENSMUST00000198799 648 ntBASIC28.44■■■□□ 2.14
Pds5bQ4VA53 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
Pds5bQ4VA53 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Pds5bQ4VA53 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Pds5bQ4VA53 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Pds5bQ4VA53 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Pds5bQ4VA53 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC28.43■■■□□ 2.14
Pds5bQ4VA53 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Pds5bQ4VA53 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
Pds5bQ4VA53 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Pds5bQ4VA53 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms