Protein–RNA interactions for Protein: Q3V038

Ttc9, Tetratricopeptide repeat protein 9A, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc9Q3V038 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ttc9Q3V038 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ttc9Q3V038 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ttc9Q3V038 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ttc9Q3V038 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ttc9Q3V038 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ttc9Q3V038 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ttc9Q3V038 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.5■□□□□ 0.39
Ttc9Q3V038 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ttc9Q3V038 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ttc9Q3V038 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ttc9Q3V038 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ttc9Q3V038 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ttc9Q3V038 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ttc9Q3V038 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Ttc9Q3V038 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ttc9Q3V038 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Ttc9Q3V038 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.49■□□□□ 0.39
Ttc9Q3V038 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.49■□□□□ 0.39
Ttc9Q3V038 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ttc9Q3V038 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.49■□□□□ 0.39
Ttc9Q3V038 Gm2213-201ENSMUST00000197485 688 ntBASIC17.49■□□□□ 0.39
Ttc9Q3V038 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.49■□□□□ 0.39
Ttc9Q3V038 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.49■□□□□ 0.39
Ttc9Q3V038 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ttc9Q3V038 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ttc9Q3V038 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ttc9Q3V038 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ttc9Q3V038 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.48■□□□□ 0.39
Ttc9Q3V038 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ttc9Q3V038 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Ttc9Q3V038 Gm11336-201ENSMUST00000118168 334 ntBASIC17.48■□□□□ 0.39
Ttc9Q3V038 Gm15794-201ENSMUST00000120182 631 ntBASIC17.48■□□□□ 0.39
Ttc9Q3V038 Gm1401-201ENSMUST00000122048 772 ntBASIC17.48■□□□□ 0.39
Ttc9Q3V038 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ttc9Q3V038 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ttc9Q3V038 Gm8000-201ENSMUST00000188378 592 ntBASIC17.48■□□□□ 0.39
Ttc9Q3V038 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.48■□□□□ 0.39
Ttc9Q3V038 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.48■□□□□ 0.39
Ttc9Q3V038 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ttc9Q3V038 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ttc9Q3V038 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ttc9Q3V038 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.48■□□□□ 0.39
Ttc9Q3V038 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ttc9Q3V038 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ttc9Q3V038 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.48■□□□□ 0.39
Ttc9Q3V038 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ttc9Q3V038 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ttc9Q3V038 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ttc9Q3V038 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ttc9Q3V038 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ttc9Q3V038 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ttc9Q3V038 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ttc9Q3V038 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ttc9Q3V038 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ttc9Q3V038 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ttc9Q3V038 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ttc9Q3V038 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ttc9Q3V038 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ttc9Q3V038 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ttc9Q3V038 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.47■□□□□ 0.39
Ttc9Q3V038 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.47■□□□□ 0.39
Ttc9Q3V038 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ttc9Q3V038 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.47■□□□□ 0.39
Ttc9Q3V038 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.47■□□□□ 0.39
Ttc9Q3V038 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ttc9Q3V038 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ttc9Q3V038 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ttc9Q3V038 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ttc9Q3V038 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ttc9Q3V038 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ttc9Q3V038 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ttc9Q3V038 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ttc9Q3V038 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ttc9Q3V038 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ttc9Q3V038 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ttc9Q3V038 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ttc9Q3V038 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ttc9Q3V038 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ttc9Q3V038 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.46■□□□□ 0.39
Ttc9Q3V038 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ttc9Q3V038 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.46■□□□□ 0.39
Ttc9Q3V038 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ttc9Q3V038 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.46■□□□□ 0.39
Ttc9Q3V038 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Ttc9Q3V038 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ttc9Q3V038 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ttc9Q3V038 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ttc9Q3V038 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ttc9Q3V038 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ttc9Q3V038 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.38
Ttc9Q3V038 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Ttc9Q3V038 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ttc9Q3V038 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ttc9Q3V038 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ttc9Q3V038 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ttc9Q3V038 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ttc9Q3V038 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.45■□□□□ 0.38
Ttc9Q3V038 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ttc9Q3V038 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms