Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Gm14859-201ENSMUST00000117752 357 ntBASIC17.27■□□□□ 0.36
Nlrc4Q3UP24 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.27■□□□□ 0.36
Nlrc4Q3UP24 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nlrc4Q3UP24 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nlrc4Q3UP24 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.27■□□□□ 0.36
Nlrc4Q3UP24 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nlrc4Q3UP24 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nlrc4Q3UP24 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nlrc4Q3UP24 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nlrc4Q3UP24 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nlrc4Q3UP24 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nlrc4Q3UP24 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Nlrc4Q3UP24 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nlrc4Q3UP24 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nlrc4Q3UP24 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nlrc4Q3UP24 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nlrc4Q3UP24 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nlrc4Q3UP24 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.26■□□□□ 0.35
Nlrc4Q3UP24 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nlrc4Q3UP24 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nlrc4Q3UP24 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Nlrc4Q3UP24 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nlrc4Q3UP24 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.26■□□□□ 0.35
Nlrc4Q3UP24 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nlrc4Q3UP24 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nlrc4Q3UP24 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nlrc4Q3UP24 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nlrc4Q3UP24 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.26■□□□□ 0.35
Nlrc4Q3UP24 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Nlrc4Q3UP24 Gm10052-201ENSMUST00000168019 960 ntBASIC17.26■□□□□ 0.35
Nlrc4Q3UP24 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.26■□□□□ 0.35
Nlrc4Q3UP24 Gm44430-201ENSMUST00000203376 995 ntBASIC17.26■□□□□ 0.35
Nlrc4Q3UP24 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.26■□□□□ 0.35
Nlrc4Q3UP24 Gm7729-201ENSMUST00000050143 801 ntBASIC17.26■□□□□ 0.35
Nlrc4Q3UP24 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nlrc4Q3UP24 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nlrc4Q3UP24 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nlrc4Q3UP24 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nlrc4Q3UP24 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
Nlrc4Q3UP24 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nlrc4Q3UP24 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nlrc4Q3UP24 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nlrc4Q3UP24 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nlrc4Q3UP24 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nlrc4Q3UP24 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nlrc4Q3UP24 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.25■□□□□ 0.35
Nlrc4Q3UP24 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nlrc4Q3UP24 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nlrc4Q3UP24 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nlrc4Q3UP24 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nlrc4Q3UP24 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nlrc4Q3UP24 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.25■□□□□ 0.35
Nlrc4Q3UP24 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nlrc4Q3UP24 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nlrc4Q3UP24 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Nlrc4Q3UP24 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Nlrc4Q3UP24 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nlrc4Q3UP24 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nlrc4Q3UP24 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Nlrc4Q3UP24 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nlrc4Q3UP24 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nlrc4Q3UP24 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nlrc4Q3UP24 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nlrc4Q3UP24 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nlrc4Q3UP24 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nlrc4Q3UP24 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Nlrc4Q3UP24 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nlrc4Q3UP24 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nlrc4Q3UP24 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nlrc4Q3UP24 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nlrc4Q3UP24 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nlrc4Q3UP24 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Nlrc4Q3UP24 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.24■□□□□ 0.35
Nlrc4Q3UP24 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nlrc4Q3UP24 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nlrc4Q3UP24 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nlrc4Q3UP24 Ank2-226ENSMUST00000189368 339 ntBASIC17.24■□□□□ 0.35
Nlrc4Q3UP24 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.24■□□□□ 0.35
Nlrc4Q3UP24 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.24■□□□□ 0.35
Nlrc4Q3UP24 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nlrc4Q3UP24 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Nlrc4Q3UP24 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nlrc4Q3UP24 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nlrc4Q3UP24 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nlrc4Q3UP24 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nlrc4Q3UP24 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nlrc4Q3UP24 Haglr-201ENSMUST00000100000 2085 ntBASIC17.24■□□□□ 0.35
Nlrc4Q3UP24 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nlrc4Q3UP24 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nlrc4Q3UP24 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nlrc4Q3UP24 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nlrc4Q3UP24 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nlrc4Q3UP24 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nlrc4Q3UP24 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nlrc4Q3UP24 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nlrc4Q3UP24 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nlrc4Q3UP24 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nlrc4Q3UP24 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nlrc4Q3UP24 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.23■□□□□ 0.35
Nlrc4Q3UP24 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms