Protein–RNA interactions for Protein: Q3ULM0

Ccdc106, Coiled-coil domain-containing protein 106, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc106Q3ULM0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ccdc106Q3ULM0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc106Q3ULM0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc106Q3ULM0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ccdc106Q3ULM0 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc106Q3ULM0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc106Q3ULM0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc106Q3ULM0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc106Q3ULM0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc106Q3ULM0 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.18■□□□□ 0.02
Ccdc106Q3ULM0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc106Q3ULM0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc106Q3ULM0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc106Q3ULM0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc106Q3ULM0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.18■□□□□ 0.02
Ccdc106Q3ULM0 Il3ra-202ENSMUST00000223589 738 ntBASIC15.18■□□□□ 0.02
Ccdc106Q3ULM0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Ccdc106Q3ULM0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc106Q3ULM0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Ccdc106Q3ULM0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc106Q3ULM0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc106Q3ULM0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Ccdc106Q3ULM0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc106Q3ULM0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc106Q3ULM0 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.18■□□□□ 0.02
Ccdc106Q3ULM0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.18■□□□□ 0.02
Ccdc106Q3ULM0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc106Q3ULM0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc106Q3ULM0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc106Q3ULM0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc106Q3ULM0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc106Q3ULM0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc106Q3ULM0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.17■□□□□ 0.02
Ccdc106Q3ULM0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc106Q3ULM0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc106Q3ULM0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc106Q3ULM0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc106Q3ULM0 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc106Q3ULM0 Gm7284-201ENSMUST00000131667 944 ntBASIC15.17■□□□□ 0.02
Ccdc106Q3ULM0 Gm25016-201ENSMUST00000158399 131 ntBASIC15.17■□□□□ 0.02
Ccdc106Q3ULM0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.17■□□□□ 0.02
Ccdc106Q3ULM0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc106Q3ULM0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc106Q3ULM0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc106Q3ULM0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Ccdc106Q3ULM0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.17■□□□□ 0.02
Ccdc106Q3ULM0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc106Q3ULM0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc106Q3ULM0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc106Q3ULM0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc106Q3ULM0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc106Q3ULM0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc106Q3ULM0 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc106Q3ULM0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc106Q3ULM0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc106Q3ULM0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc106Q3ULM0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc106Q3ULM0 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc106Q3ULM0 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc106Q3ULM0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ccdc106Q3ULM0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc106Q3ULM0 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc106Q3ULM0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.15■□□□□ 0.02
Ccdc106Q3ULM0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc106Q3ULM0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc106Q3ULM0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc106Q3ULM0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc106Q3ULM0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc106Q3ULM0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc106Q3ULM0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc106Q3ULM0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.15■□□□□ 0.02
Ccdc106Q3ULM0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms