Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Snx27Q3UHD6 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx27Q3UHD6 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx27Q3UHD6 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx27Q3UHD6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Snx27Q3UHD6 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx27Q3UHD6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Snx27Q3UHD6 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.69■□□□□ 0.42
Snx27Q3UHD6 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Snx27Q3UHD6 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx27Q3UHD6 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx27Q3UHD6 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Snx27Q3UHD6 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx27Q3UHD6 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx27Q3UHD6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Snx27Q3UHD6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx27Q3UHD6 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx27Q3UHD6 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx27Q3UHD6 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.69■□□□□ 0.42
Snx27Q3UHD6 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snx27Q3UHD6 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Gm25745-201ENSMUST00000174945 133 ntBASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Gm44357-201ENSMUST00000195897 142 ntBASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Gm19658-201ENSMUST00000196231 138 ntBASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Gm44367-201ENSMUST00000196836 138 ntBASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Gm44350-201ENSMUST00000197197 138 ntBASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Gm44390-201ENSMUST00000197533 144 ntBASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Gm44313-201ENSMUST00000198018 138 ntBASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Gm44486-201ENSMUST00000198508 138 ntBASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Gm44314-201ENSMUST00000199263 138 ntBASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Gm44394-201ENSMUST00000199558 138 ntBASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Gm44484-201ENSMUST00000199873 138 ntBASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Gm44466-201ENSMUST00000200264 138 ntBASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Gm44359-201ENSMUST00000200671 138 ntBASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Rps4l-201ENSMUST00000071745 943 ntBASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snx27Q3UHD6 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Snx27Q3UHD6 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.67■□□□□ 0.42
Snx27Q3UHD6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snx27Q3UHD6 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snx27Q3UHD6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snx27Q3UHD6 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snx27Q3UHD6 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snx27Q3UHD6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Snx27Q3UHD6 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.67■□□□□ 0.42
Snx27Q3UHD6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Snx27Q3UHD6 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.67■□□□□ 0.42
Snx27Q3UHD6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.67■□□□□ 0.42
Snx27Q3UHD6 Gm44771-201ENSMUST00000206975 626 ntBASIC17.67■□□□□ 0.42
Snx27Q3UHD6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.67■□□□□ 0.42
Snx27Q3UHD6 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snx27Q3UHD6 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snx27Q3UHD6 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snx27Q3UHD6 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snx27Q3UHD6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Snx27Q3UHD6 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.67■□□□□ 0.42
Snx27Q3UHD6 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snx27Q3UHD6 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.67■□□□□ 0.42
Snx27Q3UHD6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.67■□□□□ 0.42
Snx27Q3UHD6 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snx27Q3UHD6 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snx27Q3UHD6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snx27Q3UHD6 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Snx27Q3UHD6 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snx27Q3UHD6 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snx27Q3UHD6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snx27Q3UHD6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Snx27Q3UHD6 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snx27Q3UHD6 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.66■□□□□ 0.42
Snx27Q3UHD6 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.66■□□□□ 0.42
Snx27Q3UHD6 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Snx27Q3UHD6 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snx27Q3UHD6 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Snx27Q3UHD6 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snx27Q3UHD6 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Snx27Q3UHD6 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
Snx27Q3UHD6 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snx27Q3UHD6 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.66■□□□□ 0.42
Snx27Q3UHD6 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.66■□□□□ 0.42
Snx27Q3UHD6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Snx27Q3UHD6 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.66■□□□□ 0.42
Snx27Q3UHD6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Snx27Q3UHD6 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms