Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Shcbp1lQ3TTP0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shcbp1lQ3TTP0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shcbp1lQ3TTP0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Shcbp1lQ3TTP0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shcbp1lQ3TTP0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shcbp1lQ3TTP0 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.54■□□□□ 0.24
Shcbp1lQ3TTP0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shcbp1lQ3TTP0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Shcbp1lQ3TTP0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shcbp1lQ3TTP0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shcbp1lQ3TTP0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shcbp1lQ3TTP0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Shcbp1lQ3TTP0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Shcbp1lQ3TTP0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shcbp1lQ3TTP0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Shcbp1lQ3TTP0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shcbp1lQ3TTP0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shcbp1lQ3TTP0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Shcbp1lQ3TTP0 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.54■□□□□ 0.24
Shcbp1lQ3TTP0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shcbp1lQ3TTP0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shcbp1lQ3TTP0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shcbp1lQ3TTP0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shcbp1lQ3TTP0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shcbp1lQ3TTP0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Olfr129-201ENSMUST00000122318 993 ntBASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shcbp1lQ3TTP0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shcbp1lQ3TTP0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shcbp1lQ3TTP0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Shcbp1lQ3TTP0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Shcbp1lQ3TTP0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shcbp1lQ3TTP0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shcbp1lQ3TTP0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shcbp1lQ3TTP0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shcbp1lQ3TTP0 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.52■□□□□ 0.24
Shcbp1lQ3TTP0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shcbp1lQ3TTP0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.52■□□□□ 0.24
Shcbp1lQ3TTP0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Shcbp1lQ3TTP0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shcbp1lQ3TTP0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shcbp1lQ3TTP0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shcbp1lQ3TTP0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Shcbp1lQ3TTP0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shcbp1lQ3TTP0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shcbp1lQ3TTP0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shcbp1lQ3TTP0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shcbp1lQ3TTP0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Shcbp1lQ3TTP0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shcbp1lQ3TTP0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shcbp1lQ3TTP0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Shcbp1lQ3TTP0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Shcbp1lQ3TTP0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shcbp1lQ3TTP0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shcbp1lQ3TTP0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.51■□□□□ 0.23
Shcbp1lQ3TTP0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.51■□□□□ 0.23
Shcbp1lQ3TTP0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.51■□□□□ 0.23
Shcbp1lQ3TTP0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shcbp1lQ3TTP0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.51■□□□□ 0.23
Shcbp1lQ3TTP0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Shcbp1lQ3TTP0 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Shcbp1lQ3TTP0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shcbp1lQ3TTP0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shcbp1lQ3TTP0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shcbp1lQ3TTP0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.51■□□□□ 0.23
Shcbp1lQ3TTP0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shcbp1lQ3TTP0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shcbp1lQ3TTP0 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shcbp1lQ3TTP0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shcbp1lQ3TTP0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shcbp1lQ3TTP0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.5■□□□□ 0.23
Shcbp1lQ3TTP0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms