Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim63Q38HM4 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim63Q38HM4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim63Q38HM4 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim63Q38HM4 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
Trim63Q38HM4 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Trim63Q38HM4 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim63Q38HM4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim63Q38HM4 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim63Q38HM4 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim63Q38HM4 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim63Q38HM4 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim63Q38HM4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim63Q38HM4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim63Q38HM4 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim63Q38HM4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim63Q38HM4 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim63Q38HM4 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim63Q38HM4 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim63Q38HM4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Trim63Q38HM4 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC13.61□□□□□ -0.23
Trim63Q38HM4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC13.61□□□□□ -0.23
Trim63Q38HM4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim63Q38HM4 Gm8309-201ENSMUST00000206627 1448 ntBASIC13.61□□□□□ -0.23
Trim63Q38HM4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim63Q38HM4 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim63Q38HM4 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim63Q38HM4 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim63Q38HM4 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim63Q38HM4 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim63Q38HM4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim63Q38HM4 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim63Q38HM4 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim63Q38HM4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim63Q38HM4 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim63Q38HM4 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim63Q38HM4 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim63Q38HM4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim63Q38HM4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim63Q38HM4 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim63Q38HM4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim63Q38HM4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC13.6□□□□□ -0.23
Trim63Q38HM4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC13.6□□□□□ -0.23
Trim63Q38HM4 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.6□□□□□ -0.23
Trim63Q38HM4 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Trim63Q38HM4 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim63Q38HM4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim63Q38HM4 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim63Q38HM4 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim63Q38HM4 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim63Q38HM4 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim63Q38HM4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim63Q38HM4 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim63Q38HM4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim63Q38HM4 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim63Q38HM4 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim63Q38HM4 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim63Q38HM4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim63Q38HM4 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Trim63Q38HM4 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim63Q38HM4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim63Q38HM4 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim63Q38HM4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim63Q38HM4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim63Q38HM4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trim63Q38HM4 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim63Q38HM4 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trim63Q38HM4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim63Q38HM4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.58□□□□□ -0.24
Trim63Q38HM4 Mir6538-201ENSMUST00000183713 110 ntBASIC13.58□□□□□ -0.24
Trim63Q38HM4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim63Q38HM4 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms