Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.45■□□□□ 0.38
Col19a1Q0VF58 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Col19a1Q0VF58 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Col19a1Q0VF58 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col19a1Q0VF58 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col19a1Q0VF58 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col19a1Q0VF58 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col19a1Q0VF58 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col19a1Q0VF58 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Col19a1Q0VF58 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.44■□□□□ 0.38
Col19a1Q0VF58 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col19a1Q0VF58 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.44■□□□□ 0.38
Col19a1Q0VF58 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col19a1Q0VF58 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.44■□□□□ 0.38
Col19a1Q0VF58 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col19a1Q0VF58 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Col19a1Q0VF58 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col19a1Q0VF58 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.44■□□□□ 0.38
Col19a1Q0VF58 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col19a1Q0VF58 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col19a1Q0VF58 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col19a1Q0VF58 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col19a1Q0VF58 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col19a1Q0VF58 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col19a1Q0VF58 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col19a1Q0VF58 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col19a1Q0VF58 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col19a1Q0VF58 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col19a1Q0VF58 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Col19a1Q0VF58 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.43■□□□□ 0.38
Col19a1Q0VF58 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col19a1Q0VF58 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Col19a1Q0VF58 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col19a1Q0VF58 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col19a1Q0VF58 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col19a1Q0VF58 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col19a1Q0VF58 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.43■□□□□ 0.38
Col19a1Q0VF58 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col19a1Q0VF58 Gm12428-201ENSMUST00000119844 727 ntBASIC17.43■□□□□ 0.38
Col19a1Q0VF58 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Col19a1Q0VF58 Gm23547-201ENSMUST00000158210 271 ntBASIC17.43■□□□□ 0.38
Col19a1Q0VF58 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.43■□□□□ 0.38
Col19a1Q0VF58 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col19a1Q0VF58 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col19a1Q0VF58 Gm37153-201ENSMUST00000193637 231 ntBASIC17.43■□□□□ 0.38
Col19a1Q0VF58 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col19a1Q0VF58 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.43■□□□□ 0.38
Col19a1Q0VF58 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.43■□□□□ 0.38
Col19a1Q0VF58 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.43■□□□□ 0.38
Col19a1Q0VF58 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.43■□□□□ 0.38
Col19a1Q0VF58 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col19a1Q0VF58 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col19a1Q0VF58 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Col19a1Q0VF58 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.43■□□□□ 0.38
Col19a1Q0VF58 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Col19a1Q0VF58 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col19a1Q0VF58 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col19a1Q0VF58 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col19a1Q0VF58 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col19a1Q0VF58 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col19a1Q0VF58 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col19a1Q0VF58 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col19a1Q0VF58 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Col19a1Q0VF58 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col19a1Q0VF58 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col19a1Q0VF58 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Col19a1Q0VF58 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.42■□□□□ 0.38
Col19a1Q0VF58 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.42■□□□□ 0.38
Col19a1Q0VF58 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col19a1Q0VF58 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col19a1Q0VF58 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.42■□□□□ 0.38
Col19a1Q0VF58 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.42■□□□□ 0.38
Col19a1Q0VF58 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col19a1Q0VF58 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col19a1Q0VF58 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.42■□□□□ 0.38
Col19a1Q0VF58 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col19a1Q0VF58 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col19a1Q0VF58 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col19a1Q0VF58 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Col19a1Q0VF58 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.42■□□□□ 0.38
Col19a1Q0VF58 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col19a1Q0VF58 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col19a1Q0VF58 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.42■□□□□ 0.38
Col19a1Q0VF58 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.41■□□□□ 0.38
Col19a1Q0VF58 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col19a1Q0VF58 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col19a1Q0VF58 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col19a1Q0VF58 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col19a1Q0VF58 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col19a1Q0VF58 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col19a1Q0VF58 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.41■□□□□ 0.38
Col19a1Q0VF58 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.41■□□□□ 0.38
Col19a1Q0VF58 Gm43767-201ENSMUST00000198933 381 ntBASIC17.41■□□□□ 0.38
Col19a1Q0VF58 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col19a1Q0VF58 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.41■□□□□ 0.38
Col19a1Q0VF58 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Col19a1Q0VF58 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col19a1Q0VF58 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col19a1Q0VF58 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col19a1Q0VF58 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms