Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Thbs3Q05895 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Thbs3Q05895 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Thbs3Q05895 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Thbs3Q05895 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Thbs3Q05895 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Thbs3Q05895 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.42□□□□□ -0.1
Thbs3Q05895 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Thbs3Q05895 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Thbs3Q05895 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Thbs3Q05895 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Thbs3Q05895 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs3Q05895 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs3Q05895 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Thbs3Q05895 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs3Q05895 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Thbs3Q05895 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs3Q05895 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Thbs3Q05895 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs3Q05895 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Thbs3Q05895 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Thbs3Q05895 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs3Q05895 Gm25016-201ENSMUST00000158399 131 ntBASIC14.41□□□□□ -0.1
Thbs3Q05895 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.41□□□□□ -0.1
Thbs3Q05895 Gm6659-201ENSMUST00000174752 547 ntBASIC14.41□□□□□ -0.1
Thbs3Q05895 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs3Q05895 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.41□□□□□ -0.1
Thbs3Q05895 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs3Q05895 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs3Q05895 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.41□□□□□ -0.1
Thbs3Q05895 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs3Q05895 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs3Q05895 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs3Q05895 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs3Q05895 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs3Q05895 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs3Q05895 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs3Q05895 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs3Q05895 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs3Q05895 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thbs3Q05895 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs3Q05895 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs3Q05895 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs3Q05895 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs3Q05895 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.4□□□□□ -0.1
Thbs3Q05895 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.4□□□□□ -0.1
Thbs3Q05895 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs3Q05895 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs3Q05895 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs3Q05895 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs3Q05895 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs3Q05895 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs3Q05895 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs3Q05895 Gm23634-201ENSMUST00000175071 91 ntBASIC14.4□□□□□ -0.1
Thbs3Q05895 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs3Q05895 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Thbs3Q05895 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs3Q05895 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs3Q05895 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs3Q05895 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs3Q05895 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs3Q05895 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Thbs3Q05895 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.4□□□□□ -0.1
Thbs3Q05895 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs3Q05895 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs3Q05895 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs3Q05895 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs3Q05895 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs3Q05895 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thbs3Q05895 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs3Q05895 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs3Q05895 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs3Q05895 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs3Q05895 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Thbs3Q05895 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
Thbs3Q05895 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs3Q05895 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs3Q05895 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs3Q05895 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.39□□□□□ -0.11
Thbs3Q05895 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.39□□□□□ -0.11
Thbs3Q05895 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs3Q05895 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs3Q05895 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Thbs3Q05895 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs3Q05895 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs3Q05895 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs3Q05895 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.39□□□□□ -0.11
Thbs3Q05895 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs3Q05895 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs3Q05895 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Thbs3Q05895 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thbs3Q05895 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.38□□□□□ -0.11
Thbs3Q05895 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thbs3Q05895 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Thbs3Q05895 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Thbs3Q05895 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Thbs3Q05895 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Thbs3Q05895 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Thbs3Q05895 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thbs3Q05895 Mir770-201ENSMUST00000103252 94 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms