Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC20.71■□□□□ 0.91
Cacna1sQ02789 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1sQ02789 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1sQ02789 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC20.71■□□□□ 0.91
Cacna1sQ02789 Gm5628-201ENSMUST00000222318 1049 ntBASIC20.71■□□□□ 0.91
Cacna1sQ02789 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1sQ02789 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1sQ02789 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Cacna1sQ02789 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1sQ02789 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1sQ02789 Gm43767-201ENSMUST00000198933 381 ntBASIC20.7■□□□□ 0.9
Cacna1sQ02789 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC20.7■□□□□ 0.9
Cacna1sQ02789 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1sQ02789 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1sQ02789 Gm38318-201ENSMUST00000195769 1706 ntBASIC20.7■□□□□ 0.9
Cacna1sQ02789 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Cacna1sQ02789 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacna1sQ02789 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.7■□□□□ 0.9
Cacna1sQ02789 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1sQ02789 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1sQ02789 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1sQ02789 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Cacna1sQ02789 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1sQ02789 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1sQ02789 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1sQ02789 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1sQ02789 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cacna1sQ02789 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1sQ02789 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1sQ02789 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1sQ02789 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1sQ02789 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1sQ02789 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1sQ02789 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1sQ02789 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1sQ02789 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Cacna1sQ02789 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1sQ02789 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC20.69■□□□□ 0.9
Cacna1sQ02789 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC20.69■□□□□ 0.9
Cacna1sQ02789 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1sQ02789 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1sQ02789 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1sQ02789 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1sQ02789 Gm13294-201ENSMUST00000121757 1330 ntBASIC20.68■□□□□ 0.9
Cacna1sQ02789 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Cacna1sQ02789 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1sQ02789 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1sQ02789 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1sQ02789 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1sQ02789 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1sQ02789 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC20.68■□□□□ 0.9
Cacna1sQ02789 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC20.68■□□□□ 0.9
Cacna1sQ02789 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cacna1sQ02789 AC140397.2-201ENSMUST00000224213 834 ntBASIC20.68■□□□□ 0.9
Cacna1sQ02789 CT025626.1-201ENSMUST00000223735 1455 ntBASIC20.68■□□□□ 0.9
Cacna1sQ02789 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1sQ02789 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.68■□□□□ 0.9
Cacna1sQ02789 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacna1sQ02789 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna1sQ02789 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna1sQ02789 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna1sQ02789 Mir449b-201ENSMUST00000104833 80 ntBASIC20.67■□□□□ 0.9
Cacna1sQ02789 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna1sQ02789 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna1sQ02789 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Cacna1sQ02789 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna1sQ02789 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna1sQ02789 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Cacna1sQ02789 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Cacna1sQ02789 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna1sQ02789 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC20.67■□□□□ 0.9
Cacna1sQ02789 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC20.67■□□□□ 0.9
Cacna1sQ02789 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC20.67■□□□□ 0.9
Cacna1sQ02789 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Cacna1sQ02789 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Cacna1sQ02789 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC20.67■□□□□ 0.9
Cacna1sQ02789 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1sQ02789 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1sQ02789 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC20.66■□□□□ 0.9
Cacna1sQ02789 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1sQ02789 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1sQ02789 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1sQ02789 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1sQ02789 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1sQ02789 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1sQ02789 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Cacna1sQ02789 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1sQ02789 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1sQ02789 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC20.66■□□□□ 0.9
Cacna1sQ02789 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Cacna1sQ02789 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC20.66■□□□□ 0.9
Cacna1sQ02789 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC20.66■□□□□ 0.9
Cacna1sQ02789 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1sQ02789 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1sQ02789 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1sQ02789 Thap2-203ENSMUST00000218989 527 ntBASIC20.66■□□□□ 0.9
Cacna1sQ02789 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1sQ02789 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cacna1sQ02789 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1sQ02789 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms