Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim4P70271 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim4P70271 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim4P70271 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim4P70271 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim4P70271 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim4P70271 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim4P70271 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim4P70271 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim4P70271 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim4P70271 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim4P70271 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim4P70271 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim4P70271 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Pdlim4P70271 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim4P70271 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim4P70271 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim4P70271 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim4P70271 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Pdlim4P70271 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Pdlim4P70271 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim4P70271 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim4P70271 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim4P70271 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim4P70271 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.65□□□□□ -0.22
Pdlim4P70271 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pdlim4P70271 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim4P70271 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim4P70271 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pdlim4P70271 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pdlim4P70271 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim4P70271 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim4P70271 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim4P70271 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Pdlim4P70271 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.65□□□□□ -0.22
Pdlim4P70271 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.65□□□□□ -0.22
Pdlim4P70271 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.65□□□□□ -0.22
Pdlim4P70271 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim4P70271 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pdlim4P70271 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim4P70271 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim4P70271 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim4P70271 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim4P70271 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim4P70271 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim4P70271 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim4P70271 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim4P70271 Phf7-203ENSMUST00000226565 1971 ntBASIC13.65□□□□□ -0.22
Pdlim4P70271 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pdlim4P70271 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim4P70271 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim4P70271 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim4P70271 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Pdlim4P70271 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim4P70271 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim4P70271 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.64□□□□□ -0.23
Pdlim4P70271 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim4P70271 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim4P70271 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim4P70271 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pdlim4P70271 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim4P70271 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim4P70271 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim4P70271 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim4P70271 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.64□□□□□ -0.23
Pdlim4P70271 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.64□□□□□ -0.23
Pdlim4P70271 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.64□□□□□ -0.23
Pdlim4P70271 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.64□□□□□ -0.23
Pdlim4P70271 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim4P70271 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pdlim4P70271 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.64□□□□□ -0.23
Pdlim4P70271 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim4P70271 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pdlim4P70271 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim4P70271 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim4P70271 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim4P70271 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pdlim4P70271 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim4P70271 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim4P70271 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Pdlim4P70271 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim4P70271 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim4P70271 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim4P70271 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pdlim4P70271 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim4P70271 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim4P70271 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim4P70271 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim4P70271 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim4P70271 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim4P70271 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim4P70271 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pdlim4P70271 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim4P70271 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim4P70271 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim4P70271 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.63□□□□□ -0.23
Pdlim4P70271 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pdlim4P70271 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim4P70271 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.63□□□□□ -0.23
Pdlim4P70271 Gm11355-201ENSMUST00000121120 306 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms