Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Crnkl1P63154 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crnkl1P63154 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Crnkl1P63154 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Crnkl1P63154 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Crnkl1P63154 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Crnkl1P63154 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Crnkl1P63154 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Crnkl1P63154 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Crnkl1P63154 Gm27275-201ENSMUST00000184318 272 ntBASIC16.3■□□□□ 0.2
Crnkl1P63154 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.3■□□□□ 0.2
Crnkl1P63154 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.3■□□□□ 0.2
Crnkl1P63154 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Crnkl1P63154 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Crnkl1P63154 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.3■□□□□ 0.2
Crnkl1P63154 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Crnkl1P63154 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Crnkl1P63154 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Crnkl1P63154 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Crnkl1P63154 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Crnkl1P63154 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Crnkl1P63154 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Crnkl1P63154 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Crnkl1P63154 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Crnkl1P63154 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Crnkl1P63154 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Crnkl1P63154 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.29■□□□□ 0.2
Crnkl1P63154 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Crnkl1P63154 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.29■□□□□ 0.2
Crnkl1P63154 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Crnkl1P63154 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Crnkl1P63154 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Crnkl1P63154 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Crnkl1P63154 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.29■□□□□ 0.2
Crnkl1P63154 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Crnkl1P63154 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Crnkl1P63154 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Crnkl1P63154 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.29■□□□□ 0.2
Crnkl1P63154 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Crnkl1P63154 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Crnkl1P63154 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Crnkl1P63154 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Crnkl1P63154 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Crnkl1P63154 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Crnkl1P63154 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Crnkl1P63154 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Crnkl1P63154 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.29■□□□□ 0.2
Crnkl1P63154 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Crnkl1P63154 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Crnkl1P63154 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Crnkl1P63154 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Crnkl1P63154 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Crnkl1P63154 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Crnkl1P63154 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Crnkl1P63154 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Crnkl1P63154 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Crnkl1P63154 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.28■□□□□ 0.2
Crnkl1P63154 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Crnkl1P63154 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Crnkl1P63154 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Crnkl1P63154 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Crnkl1P63154 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Crnkl1P63154 Gm8520-201ENSMUST00000186517 868 ntBASIC16.28■□□□□ 0.2
Crnkl1P63154 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.28■□□□□ 0.2
Crnkl1P63154 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Crnkl1P63154 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Crnkl1P63154 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Crnkl1P63154 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Crnkl1P63154 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Crnkl1P63154 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Crnkl1P63154 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.28■□□□□ 0.2
Crnkl1P63154 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Crnkl1P63154 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Crnkl1P63154 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.27■□□□□ 0.2
Crnkl1P63154 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Crnkl1P63154 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Crnkl1P63154 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Crnkl1P63154 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Crnkl1P63154 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Crnkl1P63154 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Crnkl1P63154 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Crnkl1P63154 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Crnkl1P63154 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Crnkl1P63154 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.27■□□□□ 0.2
Crnkl1P63154 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.27■□□□□ 0.2
Crnkl1P63154 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Crnkl1P63154 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Crnkl1P63154 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Crnkl1P63154 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Crnkl1P63154 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Crnkl1P63154 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Crnkl1P63154 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Crnkl1P63154 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Crnkl1P63154 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Crnkl1P63154 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Crnkl1P63154 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Crnkl1P63154 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Crnkl1P63154 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.26■□□□□ 0.19
Crnkl1P63154 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Crnkl1P63154 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms