Protein–RNA interactions for Protein: P62984

Uba52, Ubiquitin-60S ribosomal protein L40, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba52P62984 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Uba52P62984 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Uba52P62984 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Uba52P62984 Timm23-208ENSMUST00000226683 750 ntBASIC14.29□□□□□ -0.12
Uba52P62984 Odf3b-204ENSMUST00000227834 930 ntBASIC14.29□□□□□ -0.12
Uba52P62984 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Uba52P62984 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Uba52P62984 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Uba52P62984 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Uba52P62984 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Uba52P62984 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Uba52P62984 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Uba52P62984 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Uba52P62984 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Uba52P62984 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Uba52P62984 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.28□□□□□ -0.12
Uba52P62984 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Uba52P62984 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Uba52P62984 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Uba52P62984 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Uba52P62984 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Uba52P62984 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Uba52P62984 Gm13559-201ENSMUST00000120476 863 ntBASIC14.28□□□□□ -0.12
Uba52P62984 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.28□□□□□ -0.12
Uba52P62984 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Uba52P62984 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Uba52P62984 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Uba52P62984 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Uba52P62984 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Uba52P62984 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.28□□□□□ -0.12
Uba52P62984 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Uba52P62984 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Uba52P62984 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Uba52P62984 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Uba52P62984 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Uba52P62984 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Uba52P62984 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Uba52P62984 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Uba52P62984 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Uba52P62984 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Uba52P62984 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Uba52P62984 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.27□□□□□ -0.12
Uba52P62984 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Uba52P62984 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Uba52P62984 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Uba52P62984 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Uba52P62984 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Uba52P62984 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Uba52P62984 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Uba52P62984 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Uba52P62984 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Uba52P62984 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.27□□□□□ -0.13
Uba52P62984 Gm11539-201ENSMUST00000119837 557 ntBASIC14.27□□□□□ -0.13
Uba52P62984 Gm13436-201ENSMUST00000120418 567 ntBASIC14.27□□□□□ -0.13
Uba52P62984 Gm12382-201ENSMUST00000122005 922 ntBASIC14.27□□□□□ -0.13
Uba52P62984 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.27□□□□□ -0.13
Uba52P62984 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.27□□□□□ -0.13
Uba52P62984 Gm37292-201ENSMUST00000192062 758 ntBASIC14.27□□□□□ -0.13
Uba52P62984 Gm38285-201ENSMUST00000192928 922 ntBASIC14.27□□□□□ -0.13
Uba52P62984 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Uba52P62984 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.27□□□□□ -0.13
Uba52P62984 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Uba52P62984 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Uba52P62984 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Uba52P62984 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Uba52P62984 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Uba52P62984 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Uba52P62984 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Uba52P62984 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Uba52P62984 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Uba52P62984 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Uba52P62984 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Uba52P62984 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.26□□□□□ -0.13
Uba52P62984 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.26□□□□□ -0.13
Uba52P62984 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Uba52P62984 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Uba52P62984 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Uba52P62984 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.26□□□□□ -0.13
Uba52P62984 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Uba52P62984 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.26□□□□□ -0.13
Uba52P62984 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.26□□□□□ -0.13
Uba52P62984 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Uba52P62984 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Uba52P62984 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.26□□□□□ -0.13
Uba52P62984 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Uba52P62984 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Uba52P62984 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Uba52P62984 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.26□□□□□ -0.13
Uba52P62984 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Uba52P62984 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Uba52P62984 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Uba52P62984 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Uba52P62984 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.26□□□□□ -0.13
Uba52P62984 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.26□□□□□ -0.13
Uba52P62984 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.25□□□□□ -0.13
Uba52P62984 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Uba52P62984 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Uba52P62984 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Uba52P62984 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Uba52P62984 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms