Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC9.78□□□□□ -0.84
Rps28P62858 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rps28P62858 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rps28P62858 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC9.78□□□□□ -0.84
Rps28P62858 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Rps28P62858 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC9.78□□□□□ -0.84
Rps28P62858 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rps28P62858 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rps28P62858 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rps28P62858 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rps28P62858 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rps28P62858 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC9.78□□□□□ -0.84
Rps28P62858 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rps28P62858 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rps28P62858 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rps28P62858 AA386476-201ENSMUST00000098781 1665 ntBASIC9.78□□□□□ -0.84
Rps28P62858 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rps28P62858 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Rps28P62858 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rps28P62858 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Rps28P62858 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rps28P62858 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rps28P62858 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rps28P62858 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC9.78□□□□□ -0.84
Rps28P62858 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rps28P62858 Gm37861-201ENSMUST00000193534 2869 ntBASIC9.78□□□□□ -0.84
Rps28P62858 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rps28P62858 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Rps28P62858 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rps28P62858 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC9.78□□□□□ -0.84
Rps28P62858 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC9.78□□□□□ -0.84
Rps28P62858 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC9.78□□□□□ -0.84
Rps28P62858 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rps28P62858 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rps28P62858 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rps28P62858 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rps28P62858 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rps28P62858 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rps28P62858 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC9.78□□□□□ -0.84
Rps28P62858 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Rps28P62858 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Rps28P62858 Gm38376-201ENSMUST00000195493 2253 ntBASIC9.77□□□□□ -0.84
Rps28P62858 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC9.77□□□□□ -0.84
Rps28P62858 Gm37374-201ENSMUST00000194954 1829 ntBASIC9.77□□□□□ -0.84
Rps28P62858 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Rps28P62858 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rps28P62858 AC166491.1-201ENSMUST00000227053 2308 ntBASIC9.77□□□□□ -0.85
Rps28P62858 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Rps28P62858 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rps28P62858 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
Rps28P62858 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rps28P62858 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Rps28P62858 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
Rps28P62858 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rps28P62858 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rps28P62858 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Rps28P62858 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rps28P62858 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rps28P62858 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rps28P62858 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rps28P62858 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rps28P62858 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rps28P62858 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Rps28P62858 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Rps28P62858 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rps28P62858 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rps28P62858 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC9.77□□□□□ -0.85
Rps28P62858 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rps28P62858 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Rps28P62858 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rps28P62858 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Rps28P62858 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Rps28P62858 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rps28P62858 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rps28P62858 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rps28P62858 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rps28P62858 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Rps28P62858 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC9.76□□□□□ -0.85
Rps28P62858 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC9.76□□□□□ -0.85
Rps28P62858 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rps28P62858 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rps28P62858 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rps28P62858 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rps28P62858 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rps28P62858 AC121961.1-201ENSMUST00000218594 1779 ntBASIC9.76□□□□□ -0.85
Rps28P62858 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rps28P62858 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC9.76□□□□□ -0.85
Rps28P62858 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Rps28P62858 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC9.76□□□□□ -0.85
Rps28P62858 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Rps28P62858 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rps28P62858 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rps28P62858 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rps28P62858 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rps28P62858 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Rps28P62858 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Rps28P62858 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Rps28P62858 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Rps28P62858 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Rps28P62858 Matn2-206ENSMUST00000228570 2798 ntBASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms