Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Lrch1P62046 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lrch1P62046 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrch1P62046 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC19.29■□□□□ 0.68
Lrch1P62046 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC19.29■□□□□ 0.68
Lrch1P62046 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrch1P62046 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Lrch1P62046 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrch1P62046 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrch1P62046 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lrch1P62046 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrch1P62046 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrch1P62046 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrch1P62046 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lrch1P62046 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrch1P62046 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrch1P62046 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Lrch1P62046 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lrch1P62046 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrch1P62046 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrch1P62046 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
Lrch1P62046 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.28■□□□□ 0.68
Lrch1P62046 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lrch1P62046 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrch1P62046 Gm5682-201ENSMUST00000173402 505 ntBASIC19.28■□□□□ 0.68
Lrch1P62046 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrch1P62046 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Lrch1P62046 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrch1P62046 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrch1P62046 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrch1P62046 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.27■□□□□ 0.68
Lrch1P62046 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Lrch1P62046 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lrch1P62046 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lrch1P62046 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lrch1P62046 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Lrch1P62046 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lrch1P62046 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lrch1P62046 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC19.27■□□□□ 0.68
Lrch1P62046 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC19.27■□□□□ 0.68
Lrch1P62046 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lrch1P62046 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Lrch1P62046 Gm37171-201ENSMUST00000192636 1185 ntBASIC19.27■□□□□ 0.68
Lrch1P62046 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC19.27■□□□□ 0.68
Lrch1P62046 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lrch1P62046 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Lrch1P62046 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.27■□□□□ 0.68
Lrch1P62046 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lrch1P62046 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.27■□□□□ 0.67
Lrch1P62046 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrch1P62046 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrch1P62046 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrch1P62046 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrch1P62046 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Lrch1P62046 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrch1P62046 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lrch1P62046 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Lrch1P62046 Gm27646-201ENSMUST00000183989 110 ntBASIC19.26■□□□□ 0.67
Lrch1P62046 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrch1P62046 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrch1P62046 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrch1P62046 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lrch1P62046 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrch1P62046 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrch1P62046 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lrch1P62046 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.26■□□□□ 0.67
Lrch1P62046 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Lrch1P62046 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrch1P62046 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.26■□□□□ 0.67
Lrch1P62046 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Lrch1P62046 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrch1P62046 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrch1P62046 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrch1P62046 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Lrch1P62046 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Lrch1P62046 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrch1P62046 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lrch1P62046 Mir6956-201ENSMUST00000183598 62 ntBASIC19.25■□□□□ 0.67
Lrch1P62046 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lrch1P62046 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.25■□□□□ 0.67
Lrch1P62046 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC19.25■□□□□ 0.67
Lrch1P62046 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrch1P62046 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrch1P62046 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrch1P62046 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lrch1P62046 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lrch1P62046 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lrch1P62046 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrch1P62046 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrch1P62046 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lrch1P62046 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrch1P62046 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lrch1P62046 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrch1P62046 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrch1P62046 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Lrch1P62046 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC19.24■□□□□ 0.67
Lrch1P62046 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrch1P62046 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lrch1P62046 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC19.24■□□□□ 0.67
Lrch1P62046 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms