Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1bP61025 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1bP61025 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC11.75□□□□□ -0.53
Cks1bP61025 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1bP61025 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1bP61025 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC11.75□□□□□ -0.53
Cks1bP61025 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1bP61025 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1bP61025 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC11.75□□□□□ -0.53
Cks1bP61025 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1bP61025 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cks1bP61025 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.74□□□□□ -0.53
Cks1bP61025 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.74□□□□□ -0.53
Cks1bP61025 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.74□□□□□ -0.53
Cks1bP61025 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC11.74□□□□□ -0.53
Cks1bP61025 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Cks1bP61025 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cks1bP61025 AC099934.2-201ENSMUST00000196389 70 ntBASIC11.74□□□□□ -0.53
Cks1bP61025 AC156953.1-201ENSMUST00000196953 70 ntBASIC11.74□□□□□ -0.53
Cks1bP61025 AC157822.2-201ENSMUST00000200291 70 ntBASIC11.74□□□□□ -0.53
Cks1bP61025 Gm18671-201ENSMUST00000214826 683 ntBASIC11.74□□□□□ -0.53
Cks1bP61025 Ap3s1-204ENSMUST00000225520 957 ntBASIC11.74□□□□□ -0.53
Cks1bP61025 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Cks1bP61025 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC11.74□□□□□ -0.53
Cks1bP61025 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cks1bP61025 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1bP61025 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1bP61025 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cks1bP61025 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1bP61025 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cks1bP61025 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1bP61025 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1bP61025 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1bP61025 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC11.73□□□□□ -0.53
Cks1bP61025 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1bP61025 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1bP61025 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cks1bP61025 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1bP61025 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cks1bP61025 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Cks1bP61025 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1bP61025 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1bP61025 Gm29791-202ENSMUST00000207888 369 ntBASIC11.73□□□□□ -0.53
Cks1bP61025 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC11.73□□□□□ -0.53
Cks1bP61025 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1bP61025 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1bP61025 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1bP61025 Gm10493-201ENSMUST00000097270 612 ntBASIC11.73□□□□□ -0.53
Cks1bP61025 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cks1bP61025 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1bP61025 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cks1bP61025 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1bP61025 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1bP61025 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Cks1bP61025 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1bP61025 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cks1bP61025 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1bP61025 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cks1bP61025 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1bP61025 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1bP61025 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1bP61025 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cks1bP61025 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1bP61025 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1bP61025 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cks1bP61025 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1bP61025 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1bP61025 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1bP61025 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC11.72□□□□□ -0.53
Cks1bP61025 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1bP61025 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Cks1bP61025 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms