Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3b6P59708 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3b6P59708 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3b6P59708 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3b6P59708 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3b6P59708 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Sf3b6P59708 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3b6P59708 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3b6P59708 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.59□□□□□ -0.07
Sf3b6P59708 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3b6P59708 Gm10812-201ENSMUST00000099864 546 ntBASIC14.59□□□□□ -0.07
Sf3b6P59708 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3b6P59708 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Sf3b6P59708 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Sf3b6P59708 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3b6P59708 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sf3b6P59708 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sf3b6P59708 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sf3b6P59708 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sf3b6P59708 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sf3b6P59708 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Sf3b6P59708 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sf3b6P59708 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sf3b6P59708 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sf3b6P59708 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Sf3b6P59708 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sf3b6P59708 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Sf3b6P59708 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3b6P59708 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3b6P59708 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3b6P59708 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Sf3b6P59708 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.58□□□□□ -0.08
Sf3b6P59708 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3b6P59708 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Sf3b6P59708 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3b6P59708 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Sf3b6P59708 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Sf3b6P59708 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3b6P59708 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3b6P59708 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3b6P59708 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sf3b6P59708 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Sf3b6P59708 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Sf3b6P59708 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b6P59708 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b6P59708 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b6P59708 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.57□□□□□ -0.08
Sf3b6P59708 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Sf3b6P59708 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b6P59708 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b6P59708 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b6P59708 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b6P59708 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b6P59708 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.57□□□□□ -0.08
Sf3b6P59708 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.57□□□□□ -0.08
Sf3b6P59708 Gm15378-201ENSMUST00000121894 207 ntBASIC14.57□□□□□ -0.08
Sf3b6P59708 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.57□□□□□ -0.08
Sf3b6P59708 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b6P59708 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b6P59708 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b6P59708 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b6P59708 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b6P59708 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b6P59708 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b6P59708 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.57□□□□□ -0.08
Sf3b6P59708 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b6P59708 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.57□□□□□ -0.08
Sf3b6P59708 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sf3b6P59708 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b6P59708 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sf3b6P59708 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.56□□□□□ -0.08
Sf3b6P59708 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.56□□□□□ -0.08
Sf3b6P59708 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b6P59708 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b6P59708 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b6P59708 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b6P59708 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b6P59708 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b6P59708 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Sf3b6P59708 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b6P59708 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b6P59708 Gm12382-201ENSMUST00000122005 922 ntBASIC14.56□□□□□ -0.08
Sf3b6P59708 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.56□□□□□ -0.08
Sf3b6P59708 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.56□□□□□ -0.08
Sf3b6P59708 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b6P59708 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sf3b6P59708 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b6P59708 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b6P59708 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b6P59708 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b6P59708 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b6P59708 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sf3b6P59708 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b6P59708 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Sf3b6P59708 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b6P59708 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sf3b6P59708 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b6P59708 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b6P59708 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b6P59708 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms