Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.15■□□□□ 0.82
Tm6sf1P58749 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Tm6sf1P58749 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Tm6sf1P58749 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Tm6sf1P58749 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Tm6sf1P58749 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tm6sf1P58749 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tm6sf1P58749 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tm6sf1P58749 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tm6sf1P58749 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.14■□□□□ 0.81
Tm6sf1P58749 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tm6sf1P58749 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Tm6sf1P58749 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tm6sf1P58749 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Tm6sf1P58749 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tm6sf1P58749 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tm6sf1P58749 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tm6sf1P58749 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tm6sf1P58749 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tm6sf1P58749 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tm6sf1P58749 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tm6sf1P58749 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tm6sf1P58749 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tm6sf1P58749 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tm6sf1P58749 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tm6sf1P58749 Olfr129-201ENSMUST00000122318 993 ntBASIC20.13■□□□□ 0.81
Tm6sf1P58749 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tm6sf1P58749 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.13■□□□□ 0.81
Tm6sf1P58749 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tm6sf1P58749 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tm6sf1P58749 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.13■□□□□ 0.81
Tm6sf1P58749 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tm6sf1P58749 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Tm6sf1P58749 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tm6sf1P58749 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tm6sf1P58749 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tm6sf1P58749 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tm6sf1P58749 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tm6sf1P58749 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tm6sf1P58749 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tm6sf1P58749 Gm43072-201ENSMUST00000200283 1671 ntBASIC20.13■□□□□ 0.81
Tm6sf1P58749 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tm6sf1P58749 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Tm6sf1P58749 Gm6858-201ENSMUST00000208582 1468 ntBASIC20.12■□□□□ 0.81
Tm6sf1P58749 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tm6sf1P58749 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tm6sf1P58749 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tm6sf1P58749 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tm6sf1P58749 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Tm6sf1P58749 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.12■□□□□ 0.81
Tm6sf1P58749 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tm6sf1P58749 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Tm6sf1P58749 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC20.12■□□□□ 0.81
Tm6sf1P58749 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.12■□□□□ 0.81
Tm6sf1P58749 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tm6sf1P58749 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tm6sf1P58749 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Tm6sf1P58749 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tm6sf1P58749 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Tm6sf1P58749 AC132265.1-201ENSMUST00000219233 1665 ntBASIC20.12■□□□□ 0.81
Tm6sf1P58749 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Tm6sf1P58749 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Tm6sf1P58749 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Tm6sf1P58749 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tm6sf1P58749 Hivep3-201ENSMUST00000084306 2973 ntBASIC20.11■□□□□ 0.81
Tm6sf1P58749 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Tm6sf1P58749 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tm6sf1P58749 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tm6sf1P58749 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.11■□□□□ 0.81
Tm6sf1P58749 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Tm6sf1P58749 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tm6sf1P58749 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tm6sf1P58749 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tm6sf1P58749 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tm6sf1P58749 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tm6sf1P58749 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Tm6sf1P58749 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Tm6sf1P58749 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tm6sf1P58749 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Tm6sf1P58749 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tm6sf1P58749 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tm6sf1P58749 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC20.1■□□□□ 0.81
Tm6sf1P58749 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tm6sf1P58749 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tm6sf1P58749 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tm6sf1P58749 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tm6sf1P58749 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tm6sf1P58749 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Tm6sf1P58749 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tm6sf1P58749 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tm6sf1P58749 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.1■□□□□ 0.81
Tm6sf1P58749 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tm6sf1P58749 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC20.1■□□□□ 0.81
Tm6sf1P58749 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Tm6sf1P58749 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tm6sf1P58749 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tm6sf1P58749 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Tm6sf1P58749 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tm6sf1P58749 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Tm6sf1P58749 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms