Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh11P55288 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh11P55288 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh11P55288 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh11P55288 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.99□□□□□ -0.01
Cdh11P55288 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh11P55288 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh11P55288 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Cdh11P55288 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Cdh11P55288 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Cdh11P55288 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh11P55288 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh11P55288 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh11P55288 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Cdh11P55288 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh11P55288 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh11P55288 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh11P55288 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Cdh11P55288 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh11P55288 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Cdh11P55288 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh11P55288 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh11P55288 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh11P55288 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.99□□□□□ -0.01
Cdh11P55288 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh11P55288 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh11P55288 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Cdh11P55288 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Cdh11P55288 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh11P55288 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh11P55288 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh11P55288 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh11P55288 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.98□□□□□ -0.01
Cdh11P55288 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Cdh11P55288 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh11P55288 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh11P55288 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
Cdh11P55288 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh11P55288 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cdh11P55288 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.98□□□□□ -0.01
Cdh11P55288 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Cdh11P55288 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.98□□□□□ -0.01
Cdh11P55288 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh11P55288 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.98□□□□□ -0.01
Cdh11P55288 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.98□□□□□ -0.01
Cdh11P55288 Gm38027-201ENSMUST00000192315 235 ntBASIC14.98□□□□□ -0.01
Cdh11P55288 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.98□□□□□ -0.01
Cdh11P55288 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.98□□□□□ -0.01
Cdh11P55288 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.98□□□□□ -0.01
Cdh11P55288 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh11P55288 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cdh11P55288 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh11P55288 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh11P55288 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh11P55288 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh11P55288 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Cdh11P55288 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cdh11P55288 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Cdh11P55288 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh11P55288 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh11P55288 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh11P55288 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh11P55288 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh11P55288 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh11P55288 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh11P55288 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh11P55288 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh11P55288 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh11P55288 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh11P55288 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.97□□□□□ -0.01
Cdh11P55288 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh11P55288 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.97□□□□□ -0.01
Cdh11P55288 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh11P55288 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh11P55288 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh11P55288 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Cdh11P55288 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh11P55288 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh11P55288 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh11P55288 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh11P55288 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cdh11P55288 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh11P55288 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh11P55288 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cdh11P55288 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh11P55288 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh11P55288 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh11P55288 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Cdh11P55288 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh11P55288 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh11P55288 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh11P55288 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Cdh11P55288 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.96□□□□□ -0.01
Cdh11P55288 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh11P55288 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh11P55288 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh11P55288 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.96□□□□□ -0.01
Cdh11P55288 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh11P55288 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Cdh11P55288 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms