Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Atxn1P54254 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atxn1P54254 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atxn1P54254 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.27■□□□□ 0.19
Atxn1P54254 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Atxn1P54254 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atxn1P54254 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Atxn1P54254 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atxn1P54254 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Atxn1P54254 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atxn1P54254 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Atxn1P54254 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atxn1P54254 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atxn1P54254 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atxn1P54254 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.26■□□□□ 0.19
Atxn1P54254 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.26■□□□□ 0.19
Atxn1P54254 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atxn1P54254 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atxn1P54254 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.26■□□□□ 0.19
Atxn1P54254 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.26■□□□□ 0.19
Atxn1P54254 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atxn1P54254 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atxn1P54254 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atxn1P54254 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Atxn1P54254 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atxn1P54254 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.26■□□□□ 0.19
Atxn1P54254 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atxn1P54254 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atxn1P54254 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atxn1P54254 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atxn1P54254 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atxn1P54254 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atxn1P54254 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atxn1P54254 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Atxn1P54254 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Atxn1P54254 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.25■□□□□ 0.19
Atxn1P54254 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Atxn1P54254 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atxn1P54254 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atxn1P54254 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atxn1P54254 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atxn1P54254 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.25■□□□□ 0.19
Atxn1P54254 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Atxn1P54254 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.25■□□□□ 0.19
Atxn1P54254 Gm27867-201ENSMUST00000184778 125 ntBASIC16.25■□□□□ 0.19
Atxn1P54254 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.25■□□□□ 0.19
Atxn1P54254 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Atxn1P54254 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atxn1P54254 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atxn1P54254 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atxn1P54254 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Atxn1P54254 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atxn1P54254 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atxn1P54254 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atxn1P54254 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atxn1P54254 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Atxn1P54254 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atxn1P54254 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.25■□□□□ 0.19
Atxn1P54254 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atxn1P54254 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atxn1P54254 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atxn1P54254 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Atxn1P54254 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atxn1P54254 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atxn1P54254 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atxn1P54254 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atxn1P54254 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atxn1P54254 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atxn1P54254 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atxn1P54254 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Atxn1P54254 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.24■□□□□ 0.19
Atxn1P54254 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atxn1P54254 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.24■□□□□ 0.19
Atxn1P54254 Gm4995-201ENSMUST00000117247 432 ntBASIC16.24■□□□□ 0.19
Atxn1P54254 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Atxn1P54254 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Atxn1P54254 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.24■□□□□ 0.19
Atxn1P54254 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.24■□□□□ 0.19
Atxn1P54254 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.24■□□□□ 0.19
Atxn1P54254 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atxn1P54254 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Atxn1P54254 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atxn1P54254 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atxn1P54254 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atxn1P54254 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Atxn1P54254 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Atxn1P54254 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atxn1P54254 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atxn1P54254 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atxn1P54254 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atxn1P54254 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atxn1P54254 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Atxn1P54254 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Atxn1P54254 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Atxn1P54254 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atxn1P54254 Gm14494-201ENSMUST00000118786 435 ntBASIC16.23■□□□□ 0.19
Atxn1P54254 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Atxn1P54254 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.23■□□□□ 0.19
Atxn1P54254 Rprl3-201ENSMUST00000157400 290 ntBASIC16.23■□□□□ 0.19
Atxn1P54254 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms