Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.4□□□□□ -0.1
GdnfP48540 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
GdnfP48540 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.4□□□□□ -0.1
GdnfP48540 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GdnfP48540 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
GdnfP48540 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
GdnfP48540 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GdnfP48540 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
GdnfP48540 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GdnfP48540 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.4□□□□□ -0.1
GdnfP48540 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.4□□□□□ -0.1
GdnfP48540 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.4□□□□□ -0.1
GdnfP48540 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GdnfP48540 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.4□□□□□ -0.1
GdnfP48540 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC14.4□□□□□ -0.1
GdnfP48540 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GdnfP48540 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
GdnfP48540 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GdnfP48540 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GdnfP48540 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
GdnfP48540 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GdnfP48540 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
GdnfP48540 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GdnfP48540 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
GdnfP48540 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GdnfP48540 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
GdnfP48540 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GdnfP48540 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GdnfP48540 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.39□□□□□ -0.11
GdnfP48540 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GdnfP48540 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GdnfP48540 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
GdnfP48540 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
GdnfP48540 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GdnfP48540 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
GdnfP48540 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GdnfP48540 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GdnfP48540 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.39□□□□□ -0.11
GdnfP48540 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GdnfP48540 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GdnfP48540 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
GdnfP48540 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GdnfP48540 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
GdnfP48540 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GdnfP48540 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GdnfP48540 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GdnfP48540 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GdnfP48540 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GdnfP48540 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GdnfP48540 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GdnfP48540 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GdnfP48540 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GdnfP48540 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GdnfP48540 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GdnfP48540 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.38□□□□□ -0.11
GdnfP48540 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
GdnfP48540 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
GdnfP48540 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GdnfP48540 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GdnfP48540 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GdnfP48540 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
GdnfP48540 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.38□□□□□ -0.11
GdnfP48540 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.38□□□□□ -0.11
GdnfP48540 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GdnfP48540 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
GdnfP48540 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.38□□□□□ -0.11
GdnfP48540 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GdnfP48540 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.38□□□□□ -0.11
GdnfP48540 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GdnfP48540 Gm715-201ENSMUST00000117865 831 ntBASIC14.38□□□□□ -0.11
GdnfP48540 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.38□□□□□ -0.11
GdnfP48540 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.38□□□□□ -0.11
GdnfP48540 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
GdnfP48540 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GdnfP48540 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.38□□□□□ -0.11
GdnfP48540 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.38□□□□□ -0.11
GdnfP48540 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.38□□□□□ -0.11
GdnfP48540 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.38□□□□□ -0.11
GdnfP48540 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.38□□□□□ -0.11
GdnfP48540 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.38□□□□□ -0.11
GdnfP48540 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
GdnfP48540 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GdnfP48540 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GdnfP48540 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.37□□□□□ -0.11
GdnfP48540 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GdnfP48540 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.37□□□□□ -0.11
GdnfP48540 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
GdnfP48540 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GdnfP48540 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GdnfP48540 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GdnfP48540 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.37□□□□□ -0.11
GdnfP48540 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GdnfP48540 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GdnfP48540 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GdnfP48540 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GdnfP48540 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.37□□□□□ -0.11
GdnfP48540 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.37□□□□□ -0.11
GdnfP48540 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.37□□□□□ -0.11
GdnfP48540 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GdnfP48540 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms