Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx3P48381 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx3P48381 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx3P48381 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx3P48381 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Rfx3P48381 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx3P48381 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Rfx3P48381 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.84□□□□□ -0.03
Rfx3P48381 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx3P48381 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx3P48381 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Rfx3P48381 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx3P48381 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx3P48381 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.84□□□□□ -0.03
Rfx3P48381 Gm27000-201ENSMUST00000182943 842 ntBASIC14.84□□□□□ -0.03
Rfx3P48381 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.84□□□□□ -0.03
Rfx3P48381 Gm21814-202ENSMUST00000203277 873 ntBASIC14.84□□□□□ -0.03
Rfx3P48381 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Rfx3P48381 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.84□□□□□ -0.03
Rfx3P48381 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx3P48381 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Rfx3P48381 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx3P48381 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx3P48381 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Rfx3P48381 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.83□□□□□ -0.03
Rfx3P48381 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.83□□□□□ -0.03
Rfx3P48381 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx3P48381 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx3P48381 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx3P48381 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.83□□□□□ -0.04
Rfx3P48381 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx3P48381 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx3P48381 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx3P48381 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Rfx3P48381 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx3P48381 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.83□□□□□ -0.04
Rfx3P48381 Mir5122-201ENSMUST00000175004 89 ntBASIC14.83□□□□□ -0.04
Rfx3P48381 Gm27463-201ENSMUST00000183569 57 ntBASIC14.83□□□□□ -0.04
Rfx3P48381 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.83□□□□□ -0.04
Rfx3P48381 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx3P48381 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.83□□□□□ -0.04
Rfx3P48381 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx3P48381 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Rfx3P48381 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Rfx3P48381 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx3P48381 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Rfx3P48381 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx3P48381 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx3P48381 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx3P48381 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx3P48381 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx3P48381 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Rfx3P48381 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx3P48381 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx3P48381 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx3P48381 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx3P48381 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Rfx3P48381 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx3P48381 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.82□□□□□ -0.04
Rfx3P48381 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx3P48381 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx3P48381 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.82□□□□□ -0.04
Rfx3P48381 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.82□□□□□ -0.04
Rfx3P48381 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rfx3P48381 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Rfx3P48381 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx3P48381 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx3P48381 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx3P48381 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx3P48381 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.82□□□□□ -0.04
Rfx3P48381 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Rfx3P48381 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx3P48381 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rfx3P48381 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx3P48381 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfx3P48381 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx3P48381 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx3P48381 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx3P48381 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.81□□□□□ -0.04
Rfx3P48381 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx3P48381 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx3P48381 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx3P48381 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx3P48381 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.81□□□□□ -0.04
Rfx3P48381 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx3P48381 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.81□□□□□ -0.04
Rfx3P48381 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx3P48381 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx3P48381 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx3P48381 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx3P48381 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx3P48381 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Rfx3P48381 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Rfx3P48381 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
Rfx3P48381 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx3P48381 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx3P48381 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx3P48381 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx3P48381 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfx3P48381 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms