Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Xcl1P47993 Nsd1-203ENSMUST00000224156 1149 ntBASIC10.75□□□□□ -0.69
Xcl1P47993 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Xcl1P47993 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Xcl1P47993 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC10.75□□□□□ -0.69
Xcl1P47993 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Xcl1P47993 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Xcl1P47993 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Xcl1P47993 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Xcl1P47993 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Xcl1P47993 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Xcl1P47993 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Xcl1P47993 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Xcl1P47993 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Xcl1P47993 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Xcl1P47993 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Xcl1P47993 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Xcl1P47993 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Xcl1P47993 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Xcl1P47993 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Xcl1P47993 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Xcl1P47993 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Xcl1P47993 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Xcl1P47993 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Xcl1P47993 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Xcl1P47993 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC10.74□□□□□ -0.69
Xcl1P47993 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Xcl1P47993 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Xcl1P47993 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Xcl1P47993 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Xcl1P47993 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Xcl1P47993 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC10.74□□□□□ -0.69
Xcl1P47993 Gm45444-201ENSMUST00000211394 898 ntBASIC10.74□□□□□ -0.69
Xcl1P47993 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Xcl1P47993 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Xcl1P47993 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Xcl1P47993 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC10.74□□□□□ -0.69
Xcl1P47993 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Xcl1P47993 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Xcl1P47993 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Xcl1P47993 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Xcl1P47993 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC10.74□□□□□ -0.69
Xcl1P47993 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Xcl1P47993 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Xcl1P47993 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Xcl1P47993 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Xcl1P47993 Gm43272-201ENSMUST00000200599 1584 ntBASIC10.73□□□□□ -0.69
Xcl1P47993 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Xcl1P47993 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Xcl1P47993 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Xcl1P47993 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Xcl1P47993 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Xcl1P47993 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC10.73□□□□□ -0.69
Xcl1P47993 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Xcl1P47993 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Xcl1P47993 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Xcl1P47993 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Xcl1P47993 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Xcl1P47993 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Xcl1P47993 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Xcl1P47993 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Xcl1P47993 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC10.73□□□□□ -0.69
Xcl1P47993 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC10.73□□□□□ -0.69
Xcl1P47993 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC10.73□□□□□ -0.69
Xcl1P47993 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Xcl1P47993 Gm10584-201ENSMUST00000207036 2628 ntBASIC10.73□□□□□ -0.69
Xcl1P47993 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Xcl1P47993 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Xcl1P47993 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Xcl1P47993 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Xcl1P47993 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Xcl1P47993 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Xcl1P47993 Gm10209-201ENSMUST00000203397 1607 ntBASIC10.73□□□□□ -0.69
Xcl1P47993 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Xcl1P47993 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Xcl1P47993 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Xcl1P47993 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Xcl1P47993 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Xcl1P47993 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Xcl1P47993 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Xcl1P47993 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Xcl1P47993 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Xcl1P47993 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Xcl1P47993 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Xcl1P47993 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Xcl1P47993 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Xcl1P47993 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Xcl1P47993 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Xcl1P47993 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Xcl1P47993 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Xcl1P47993 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Xcl1P47993 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC10.72□□□□□ -0.69
Xcl1P47993 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Xcl1P47993 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Xcl1P47993 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Xcl1P47993 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Xcl1P47993 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Xcl1P47993 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Xcl1P47993 AC115863.1-201ENSMUST00000214815 1813 ntBASIC10.72□□□□□ -0.69
Xcl1P47993 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms