Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Vps4bP46467 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.67■□□□□ 0.26
Vps4bP46467 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps4bP46467 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps4bP46467 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps4bP46467 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Vps4bP46467 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps4bP46467 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps4bP46467 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps4bP46467 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.66■□□□□ 0.26
Vps4bP46467 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps4bP46467 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps4bP46467 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps4bP46467 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps4bP46467 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps4bP46467 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps4bP46467 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps4bP46467 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps4bP46467 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps4bP46467 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Vps4bP46467 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps4bP46467 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps4bP46467 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vps4bP46467 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
Vps4bP46467 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps4bP46467 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.65■□□□□ 0.26
Vps4bP46467 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.65■□□□□ 0.26
Vps4bP46467 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps4bP46467 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
Vps4bP46467 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.65■□□□□ 0.26
Vps4bP46467 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vps4bP46467 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps4bP46467 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps4bP46467 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Vps4bP46467 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Vps4bP46467 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps4bP46467 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps4bP46467 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps4bP46467 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.65■□□□□ 0.26
Vps4bP46467 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps4bP46467 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Vps4bP46467 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps4bP46467 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps4bP46467 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vps4bP46467 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps4bP46467 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps4bP46467 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Vps4bP46467 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.64■□□□□ 0.25
Vps4bP46467 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps4bP46467 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps4bP46467 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.64■□□□□ 0.25
Vps4bP46467 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps4bP46467 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.64■□□□□ 0.25
Vps4bP46467 Gm43799-201ENSMUST00000201845 579 ntBASIC16.64■□□□□ 0.25
Vps4bP46467 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.64■□□□□ 0.25
Vps4bP46467 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps4bP46467 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.64■□□□□ 0.25
Vps4bP46467 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps4bP46467 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps4bP46467 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps4bP46467 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vps4bP46467 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vps4bP46467 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.64■□□□□ 0.25
Vps4bP46467 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps4bP46467 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps4bP46467 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps4bP46467 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps4bP46467 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4bP46467 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4bP46467 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4bP46467 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4bP46467 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4bP46467 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4bP46467 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4bP46467 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4bP46467 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4bP46467 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4bP46467 Gm6433-201ENSMUST00000118634 875 ntBASIC16.63■□□□□ 0.25
Vps4bP46467 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Vps4bP46467 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.63■□□□□ 0.25
Vps4bP46467 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.63■□□□□ 0.25
Vps4bP46467 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.63■□□□□ 0.25
Vps4bP46467 Gm18115-201ENSMUST00000221209 621 ntBASIC16.63■□□□□ 0.25
Vps4bP46467 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4bP46467 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Vps4bP46467 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4bP46467 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Vps4bP46467 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Vps4bP46467 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4bP46467 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4bP46467 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps4bP46467 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4bP46467 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.62■□□□□ 0.25
Vps4bP46467 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4bP46467 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4bP46467 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Vps4bP46467 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4bP46467 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Vps4bP46467 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4bP46467 Gm11539-201ENSMUST00000119837 557 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms