Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.89■□□□□ 0.29
Cxcl12P40224 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cxcl12P40224 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cxcl12P40224 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cxcl12P40224 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.89■□□□□ 0.29
Cxcl12P40224 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cxcl12P40224 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cxcl12P40224 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cxcl12P40224 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cxcl12P40224 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Cxcl12P40224 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Cxcl12P40224 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cxcl12P40224 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.88■□□□□ 0.29
Cxcl12P40224 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cxcl12P40224 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Cxcl12P40224 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cxcl12P40224 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Cxcl12P40224 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Cxcl12P40224 Gm27321-201ENSMUST00000185021 205 ntBASIC16.88■□□□□ 0.29
Cxcl12P40224 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.88■□□□□ 0.29
Cxcl12P40224 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.88■□□□□ 0.29
Cxcl12P40224 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cxcl12P40224 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cxcl12P40224 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cxcl12P40224 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cxcl12P40224 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cxcl12P40224 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cxcl12P40224 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cxcl12P40224 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cxcl12P40224 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cxcl12P40224 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl12P40224 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl12P40224 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl12P40224 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl12P40224 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl12P40224 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl12P40224 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.87■□□□□ 0.29
Cxcl12P40224 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl12P40224 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl12P40224 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.87■□□□□ 0.29
Cxcl12P40224 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.87■□□□□ 0.29
Cxcl12P40224 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl12P40224 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl12P40224 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl12P40224 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl12P40224 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl12P40224 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl12P40224 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.87■□□□□ 0.29
Cxcl12P40224 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl12P40224 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl12P40224 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.87■□□□□ 0.29
Cxcl12P40224 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cxcl12P40224 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.86■□□□□ 0.29
Cxcl12P40224 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cxcl12P40224 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Cxcl12P40224 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cxcl12P40224 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cxcl12P40224 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cxcl12P40224 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cxcl12P40224 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cxcl12P40224 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.86■□□□□ 0.29
Cxcl12P40224 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.86■□□□□ 0.29
Cxcl12P40224 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cxcl12P40224 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.86■□□□□ 0.29
Cxcl12P40224 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cxcl12P40224 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.86■□□□□ 0.29
Cxcl12P40224 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cxcl12P40224 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cxcl12P40224 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cxcl12P40224 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Cxcl12P40224 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cxcl12P40224 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cxcl12P40224 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cxcl12P40224 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Cxcl12P40224 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cxcl12P40224 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cxcl12P40224 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cxcl12P40224 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cxcl12P40224 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cxcl12P40224 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cxcl12P40224 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cxcl12P40224 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cxcl12P40224 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cxcl12P40224 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Cxcl12P40224 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.85■□□□□ 0.29
Cxcl12P40224 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.85■□□□□ 0.29
Cxcl12P40224 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cxcl12P40224 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cxcl12P40224 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cxcl12P40224 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cxcl12P40224 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cxcl12P40224 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cxcl12P40224 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cxcl12P40224 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cxcl12P40224 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cxcl12P40224 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cxcl12P40224 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.84■□□□□ 0.29
Cxcl12P40224 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.84■□□□□ 0.29
Cxcl12P40224 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cxcl12P40224 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms