Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Upk2P38575 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.41□□□□□ -0.1
Upk2P38575 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Upk2P38575 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.41□□□□□ -0.1
Upk2P38575 Gm18101-201ENSMUST00000215769 548 ntBASIC14.41□□□□□ -0.1
Upk2P38575 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Upk2P38575 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk2P38575 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Upk2P38575 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Upk2P38575 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk2P38575 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk2P38575 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk2P38575 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk2P38575 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk2P38575 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Upk2P38575 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.41□□□□□ -0.1
Upk2P38575 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.41□□□□□ -0.1
Upk2P38575 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk2P38575 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk2P38575 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Upk2P38575 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.4□□□□□ -0.1
Upk2P38575 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk2P38575 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk2P38575 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk2P38575 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk2P38575 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Upk2P38575 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk2P38575 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.4□□□□□ -0.1
Upk2P38575 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.4□□□□□ -0.1
Upk2P38575 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk2P38575 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Upk2P38575 Gm18032-201ENSMUST00000222541 538 ntBASIC14.4□□□□□ -0.1
Upk2P38575 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Upk2P38575 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Upk2P38575 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
Upk2P38575 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Upk2P38575 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk2P38575 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk2P38575 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk2P38575 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Upk2P38575 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.4□□□□□ -0.1
Upk2P38575 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Upk2P38575 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Upk2P38575 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk2P38575 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Upk2P38575 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk2P38575 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk2P38575 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
Upk2P38575 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk2P38575 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upk2P38575 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk2P38575 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk2P38575 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk2P38575 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upk2P38575 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk2P38575 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.39□□□□□ -0.11
Upk2P38575 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Upk2P38575 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.39□□□□□ -0.11
Upk2P38575 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.39□□□□□ -0.11
Upk2P38575 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upk2P38575 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Upk2P38575 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk2P38575 Gm36967-201ENSMUST00000193814 266 ntBASIC14.39□□□□□ -0.11
Upk2P38575 Gm9987-201ENSMUST00000069768 567 ntBASIC14.39□□□□□ -0.11
Upk2P38575 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upk2P38575 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Upk2P38575 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk2P38575 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk2P38575 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upk2P38575 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk2P38575 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.39□□□□□ -0.11
Upk2P38575 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upk2P38575 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Upk2P38575 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk2P38575 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk2P38575 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk2P38575 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk2P38575 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk2P38575 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.38□□□□□ -0.11
Upk2P38575 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Upk2P38575 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk2P38575 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.38□□□□□ -0.11
Upk2P38575 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk2P38575 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk2P38575 Gm11355-201ENSMUST00000121120 306 ntBASIC14.38□□□□□ -0.11
Upk2P38575 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Upk2P38575 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Upk2P38575 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.38□□□□□ -0.11
Upk2P38575 Gm37722-201ENSMUST00000193757 208 ntBASIC14.38□□□□□ -0.11
Upk2P38575 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Upk2P38575 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk2P38575 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk2P38575 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Upk2P38575 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk2P38575 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Upk2P38575 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk2P38575 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk2P38575 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Upk2P38575 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk2P38575 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms