Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LdlrP35951 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LdlrP35951 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LdlrP35951 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LdlrP35951 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LdlrP35951 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LdlrP35951 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LdlrP35951 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.35■□□□□ 0.21
LdlrP35951 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LdlrP35951 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LdlrP35951 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
LdlrP35951 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LdlrP35951 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LdlrP35951 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LdlrP35951 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LdlrP35951 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LdlrP35951 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.34■□□□□ 0.21
LdlrP35951 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.34■□□□□ 0.21
LdlrP35951 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.34■□□□□ 0.21
LdlrP35951 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LdlrP35951 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.34■□□□□ 0.21
LdlrP35951 Gm27741-201ENSMUST00000185060 237 ntBASIC16.34■□□□□ 0.21
LdlrP35951 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.34■□□□□ 0.21
LdlrP35951 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LdlrP35951 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LdlrP35951 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LdlrP35951 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LdlrP35951 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LdlrP35951 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LdlrP35951 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LdlrP35951 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LdlrP35951 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LdlrP35951 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
LdlrP35951 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LdlrP35951 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LdlrP35951 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LdlrP35951 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LdlrP35951 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LdlrP35951 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LdlrP35951 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LdlrP35951 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LdlrP35951 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LdlrP35951 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
LdlrP35951 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LdlrP35951 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LdlrP35951 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LdlrP35951 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.33■□□□□ 0.2
LdlrP35951 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LdlrP35951 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LdlrP35951 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LdlrP35951 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.33■□□□□ 0.2
LdlrP35951 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
LdlrP35951 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.33■□□□□ 0.2
LdlrP35951 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LdlrP35951 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LdlrP35951 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.33■□□□□ 0.2
LdlrP35951 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.33■□□□□ 0.2
LdlrP35951 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LdlrP35951 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LdlrP35951 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LdlrP35951 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LdlrP35951 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LdlrP35951 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LdlrP35951 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LdlrP35951 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LdlrP35951 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LdlrP35951 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LdlrP35951 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LdlrP35951 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LdlrP35951 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LdlrP35951 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LdlrP35951 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LdlrP35951 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LdlrP35951 Gm23634-201ENSMUST00000175071 91 ntBASIC16.32■□□□□ 0.2
LdlrP35951 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LdlrP35951 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LdlrP35951 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LdlrP35951 Gm9731-201ENSMUST00000209480 747 ntBASIC16.32■□□□□ 0.2
LdlrP35951 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.32■□□□□ 0.2
LdlrP35951 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LdlrP35951 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.32■□□□□ 0.2
LdlrP35951 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LdlrP35951 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LdlrP35951 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LdlrP35951 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LdlrP35951 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LdlrP35951 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LdlrP35951 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LdlrP35951 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LdlrP35951 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LdlrP35951 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LdlrP35951 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LdlrP35951 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.31■□□□□ 0.2
LdlrP35951 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.31■□□□□ 0.2
LdlrP35951 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.31■□□□□ 0.2
LdlrP35951 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LdlrP35951 Gm18032-201ENSMUST00000222541 538 ntBASIC16.31■□□□□ 0.2
LdlrP35951 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LdlrP35951 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LdlrP35951 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms