Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vcam1P29533 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vcam1P29533 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vcam1P29533 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vcam1P29533 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vcam1P29533 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vcam1P29533 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vcam1P29533 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vcam1P29533 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Vcam1P29533 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.81■□□□□ 0.6
Vcam1P29533 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Vcam1P29533 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vcam1P29533 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vcam1P29533 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.81■□□□□ 0.6
Vcam1P29533 Gm15173-201ENSMUST00000122049 433 ntBASIC18.81■□□□□ 0.6
Vcam1P29533 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vcam1P29533 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vcam1P29533 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.81■□□□□ 0.6
Vcam1P29533 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vcam1P29533 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.81■□□□□ 0.6
Vcam1P29533 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vcam1P29533 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Vcam1P29533 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vcam1P29533 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vcam1P29533 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vcam1P29533 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vcam1P29533 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vcam1P29533 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vcam1P29533 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.8■□□□□ 0.6
Vcam1P29533 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vcam1P29533 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.8■□□□□ 0.6
Vcam1P29533 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vcam1P29533 Gm8655-201ENSMUST00000221159 852 ntBASIC18.8■□□□□ 0.6
Vcam1P29533 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Vcam1P29533 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Vcam1P29533 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vcam1P29533 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vcam1P29533 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Vcam1P29533 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vcam1P29533 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.8■□□□□ 0.6
Vcam1P29533 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vcam1P29533 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Vcam1P29533 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vcam1P29533 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vcam1P29533 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vcam1P29533 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Vcam1P29533 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vcam1P29533 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.79■□□□□ 0.6
Vcam1P29533 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vcam1P29533 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Vcam1P29533 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vcam1P29533 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vcam1P29533 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vcam1P29533 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vcam1P29533 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vcam1P29533 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vcam1P29533 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.79■□□□□ 0.6
Vcam1P29533 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.79■□□□□ 0.6
Vcam1P29533 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vcam1P29533 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vcam1P29533 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vcam1P29533 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vcam1P29533 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.79■□□□□ 0.6
Vcam1P29533 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vcam1P29533 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.79■□□□□ 0.6
Vcam1P29533 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vcam1P29533 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vcam1P29533 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vcam1P29533 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vcam1P29533 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vcam1P29533 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vcam1P29533 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Vcam1P29533 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vcam1P29533 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vcam1P29533 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.78■□□□□ 0.6
Vcam1P29533 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vcam1P29533 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vcam1P29533 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vcam1P29533 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vcam1P29533 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.77■□□□□ 0.6
Vcam1P29533 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vcam1P29533 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Vcam1P29533 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vcam1P29533 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vcam1P29533 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vcam1P29533 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vcam1P29533 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vcam1P29533 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.77■□□□□ 0.6
Vcam1P29533 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Vcam1P29533 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vcam1P29533 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.77■□□□□ 0.6
Vcam1P29533 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vcam1P29533 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vcam1P29533 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vcam1P29533 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Vcam1P29533 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vcam1P29533 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vcam1P29533 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vcam1P29533 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.76■□□□□ 0.59
Vcam1P29533 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms