Protein–RNA interactions for Protein: P29452

Casp1, Caspase-1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp1P29452 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casp1P29452 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casp1P29452 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Casp1P29452 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casp1P29452 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Casp1P29452 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casp1P29452 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casp1P29452 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casp1P29452 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casp1P29452 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casp1P29452 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casp1P29452 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casp1P29452 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Casp1P29452 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Casp1P29452 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casp1P29452 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Casp1P29452 Gm27525-201ENSMUST00000184465 107 ntBASIC19.68■□□□□ 0.74
Casp1P29452 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.68■□□□□ 0.74
Casp1P29452 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.68■□□□□ 0.74
Casp1P29452 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casp1P29452 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casp1P29452 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Casp1P29452 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casp1P29452 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casp1P29452 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Casp1P29452 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Casp1P29452 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Casp1P29452 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.67■□□□□ 0.74
Casp1P29452 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.67■□□□□ 0.74
Casp1P29452 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Casp1P29452 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Casp1P29452 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.67■□□□□ 0.74
Casp1P29452 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Casp1P29452 Gm18206-201ENSMUST00000207027 926 ntBASIC19.67■□□□□ 0.74
Casp1P29452 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.67■□□□□ 0.74
Casp1P29452 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Casp1P29452 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Casp1P29452 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Casp1P29452 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.67■□□□□ 0.74
Casp1P29452 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Casp1P29452 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Casp1P29452 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Casp1P29452 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Casp1P29452 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Casp1P29452 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Casp1P29452 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casp1P29452 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casp1P29452 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casp1P29452 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Casp1P29452 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Casp1P29452 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casp1P29452 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Casp1P29452 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.66■□□□□ 0.74
Casp1P29452 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casp1P29452 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casp1P29452 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casp1P29452 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casp1P29452 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casp1P29452 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casp1P29452 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casp1P29452 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casp1P29452 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Casp1P29452 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.66■□□□□ 0.74
Casp1P29452 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.66■□□□□ 0.74
Casp1P29452 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Casp1P29452 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Casp1P29452 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.65■□□□□ 0.74
Casp1P29452 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casp1P29452 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casp1P29452 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casp1P29452 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.65■□□□□ 0.74
Casp1P29452 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casp1P29452 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.65■□□□□ 0.74
Casp1P29452 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casp1P29452 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casp1P29452 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casp1P29452 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casp1P29452 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casp1P29452 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Casp1P29452 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Casp1P29452 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Casp1P29452 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casp1P29452 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casp1P29452 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.64■□□□□ 0.73
Casp1P29452 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Casp1P29452 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Casp1P29452 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Casp1P29452 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Casp1P29452 Gm10060-201ENSMUST00000212002 111 ntBASIC19.64■□□□□ 0.73
Casp1P29452 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casp1P29452 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casp1P29452 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Casp1P29452 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.64■□□□□ 0.73
Casp1P29452 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.64■□□□□ 0.73
Casp1P29452 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.64■□□□□ 0.73
Casp1P29452 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casp1P29452 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casp1P29452 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casp1P29452 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casp1P29452 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms