Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RxrbP28704 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.51■□□□□ 0.23
RxrbP28704 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RxrbP28704 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.51■□□□□ 0.23
RxrbP28704 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.51■□□□□ 0.23
RxrbP28704 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RxrbP28704 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RxrbP28704 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RxrbP28704 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.51■□□□□ 0.23
RxrbP28704 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RxrbP28704 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RxrbP28704 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RxrbP28704 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RxrbP28704 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.51■□□□□ 0.23
RxrbP28704 Gm5643-201ENSMUST00000117081 966 ntBASIC16.51■□□□□ 0.23
RxrbP28704 Gm12527-201ENSMUST00000117967 564 ntBASIC16.51■□□□□ 0.23
RxrbP28704 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RxrbP28704 Gm43183-201ENSMUST00000200632 547 ntBASIC16.51■□□□□ 0.23
RxrbP28704 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.51■□□□□ 0.23
RxrbP28704 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.51■□□□□ 0.23
RxrbP28704 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RxrbP28704 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RxrbP28704 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RxrbP28704 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RxrbP28704 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RxrbP28704 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RxrbP28704 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.51■□□□□ 0.23
RxrbP28704 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RxrbP28704 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RxrbP28704 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RxrbP28704 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RxrbP28704 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RxrbP28704 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.5■□□□□ 0.23
RxrbP28704 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.5■□□□□ 0.23
RxrbP28704 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.5■□□□□ 0.23
RxrbP28704 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RxrbP28704 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RxrbP28704 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RxrbP28704 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RxrbP28704 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.5■□□□□ 0.23
RxrbP28704 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RxrbP28704 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
RxrbP28704 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RxrbP28704 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RxrbP28704 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RxrbP28704 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RxrbP28704 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.49■□□□□ 0.23
RxrbP28704 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.49■□□□□ 0.23
RxrbP28704 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RxrbP28704 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RxrbP28704 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RxrbP28704 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.49■□□□□ 0.23
RxrbP28704 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.49■□□□□ 0.23
RxrbP28704 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.49■□□□□ 0.23
RxrbP28704 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RxrbP28704 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RxrbP28704 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.49■□□□□ 0.23
RxrbP28704 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RxrbP28704 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RxrbP28704 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RxrbP28704 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RxrbP28704 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RxrbP28704 App-207ENSMUST00000227737 2827 ntBASIC16.49■□□□□ 0.23
RxrbP28704 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RxrbP28704 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RxrbP28704 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RxrbP28704 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RxrbP28704 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RxrbP28704 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RxrbP28704 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RxrbP28704 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
RxrbP28704 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RxrbP28704 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RxrbP28704 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.48■□□□□ 0.23
RxrbP28704 Gm37025-201ENSMUST00000195159 829 ntBASIC16.48■□□□□ 0.23
RxrbP28704 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.48■□□□□ 0.23
RxrbP28704 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.48■□□□□ 0.23
RxrbP28704 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RxrbP28704 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RxrbP28704 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RxrbP28704 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RxrbP28704 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RxrbP28704 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RxrbP28704 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RxrbP28704 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RxrbP28704 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RxrbP28704 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RxrbP28704 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RxrbP28704 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RxrbP28704 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RxrbP28704 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RxrbP28704 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RxrbP28704 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RxrbP28704 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RxrbP28704 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RxrbP28704 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RxrbP28704 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RxrbP28704 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RxrbP28704 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RxrbP28704 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms