Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl6P27784 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl6P27784 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl6P27784 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl6P27784 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ccl6P27784 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl6P27784 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.81□□□□□ -0.36
Ccl6P27784 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ccl6P27784 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.81□□□□□ -0.36
Ccl6P27784 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl6P27784 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Ccl6P27784 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl6P27784 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.81□□□□□ -0.36
Ccl6P27784 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Ccl6P27784 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl6P27784 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl6P27784 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ccl6P27784 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ccl6P27784 Phf7-203ENSMUST00000226565 1971 ntBASIC12.81□□□□□ -0.36
Ccl6P27784 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.81□□□□□ -0.36
Ccl6P27784 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.81□□□□□ -0.36
Ccl6P27784 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl6P27784 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl6P27784 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl6P27784 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl6P27784 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl6P27784 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl6P27784 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl6P27784 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl6P27784 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl6P27784 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl6P27784 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl6P27784 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl6P27784 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl6P27784 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl6P27784 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl6P27784 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl6P27784 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl6P27784 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl6P27784 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccl6P27784 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccl6P27784 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.8□□□□□ -0.36
Ccl6P27784 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccl6P27784 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.8□□□□□ -0.36
Ccl6P27784 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl6P27784 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ccl6P27784 Gm10566-201ENSMUST00000086739 996 ntBASIC12.8□□□□□ -0.36
Ccl6P27784 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ccl6P27784 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl6P27784 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl6P27784 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl6P27784 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccl6P27784 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl6P27784 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl6P27784 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl6P27784 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl6P27784 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl6P27784 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl6P27784 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccl6P27784 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl6P27784 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl6P27784 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl6P27784 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ccl6P27784 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ccl6P27784 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl6P27784 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl6P27784 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccl6P27784 Gm13216-201ENSMUST00000117145 591 ntBASIC12.79□□□□□ -0.36
Ccl6P27784 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.79□□□□□ -0.36
Ccl6P27784 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.79□□□□□ -0.36
Ccl6P27784 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.79□□□□□ -0.36
Ccl6P27784 Mir5130-201ENSMUST00000175160 84 ntBASIC12.79□□□□□ -0.36
Ccl6P27784 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.79□□□□□ -0.36
Ccl6P27784 Gm7213-201ENSMUST00000215977 950 ntBASIC12.79□□□□□ -0.36
Ccl6P27784 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.79□□□□□ -0.36
Ccl6P27784 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl6P27784 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl6P27784 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl6P27784 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl6P27784 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccl6P27784 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl6P27784 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.79□□□□□ -0.36
Ccl6P27784 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl6P27784 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl6P27784 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl6P27784 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ccl6P27784 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl6P27784 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl6P27784 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ccl6P27784 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl6P27784 Haglr-201ENSMUST00000100000 2085 ntBASIC12.79□□□□□ -0.36
Ccl6P27784 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl6P27784 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl6P27784 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl6P27784 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl6P27784 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl6P27784 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl6P27784 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl6P27784 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl6P27784 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms