Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pde6aP27664 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pde6aP27664 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pde6aP27664 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pde6aP27664 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pde6aP27664 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pde6aP27664 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pde6aP27664 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.03■□□□□ 0.64
Pde6aP27664 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Pde6aP27664 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Pde6aP27664 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Pde6aP27664 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pde6aP27664 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Pde6aP27664 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pde6aP27664 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pde6aP27664 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Pde6aP27664 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pde6aP27664 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.03■□□□□ 0.64
Pde6aP27664 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pde6aP27664 Gm27742-201ENSMUST00000184667 60 ntBASIC19.03■□□□□ 0.64
Pde6aP27664 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pde6aP27664 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pde6aP27664 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pde6aP27664 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pde6aP27664 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.03■□□□□ 0.64
Pde6aP27664 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pde6aP27664 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pde6aP27664 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pde6aP27664 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.03■□□□□ 0.64
Pde6aP27664 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.02■□□□□ 0.64
Pde6aP27664 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pde6aP27664 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Pde6aP27664 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pde6aP27664 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.02■□□□□ 0.64
Pde6aP27664 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Pde6aP27664 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pde6aP27664 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pde6aP27664 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pde6aP27664 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pde6aP27664 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pde6aP27664 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pde6aP27664 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.02■□□□□ 0.64
Pde6aP27664 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.02■□□□□ 0.64
Pde6aP27664 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pde6aP27664 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pde6aP27664 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pde6aP27664 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pde6aP27664 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pde6aP27664 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pde6aP27664 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pde6aP27664 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pde6aP27664 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pde6aP27664 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pde6aP27664 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pde6aP27664 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pde6aP27664 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pde6aP27664 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pde6aP27664 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Pde6aP27664 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pde6aP27664 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pde6aP27664 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.01■□□□□ 0.63
Pde6aP27664 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Pde6aP27664 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pde6aP27664 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pde6aP27664 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Pde6aP27664 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pde6aP27664 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Pde6aP27664 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pde6aP27664 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Pde6aP27664 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pde6aP27664 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pde6aP27664 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pde6aP27664 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
Pde6aP27664 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Pde6aP27664 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pde6aP27664 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pde6aP27664 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19■□□□□ 0.63
Pde6aP27664 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pde6aP27664 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pde6aP27664 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pde6aP27664 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Pde6aP27664 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19■□□□□ 0.63
Pde6aP27664 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Pde6aP27664 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Pde6aP27664 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pde6aP27664 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pde6aP27664 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pde6aP27664 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pde6aP27664 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pde6aP27664 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pde6aP27664 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pde6aP27664 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Pde6aP27664 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pde6aP27664 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pde6aP27664 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Pde6aP27664 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.99■□□□□ 0.63
Pde6aP27664 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pde6aP27664 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pde6aP27664 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pde6aP27664 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms