Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.69□□□□□ -0.22
Col8a2P25318 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col8a2P25318 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col8a2P25318 Gm34391-201ENSMUST00000203706 907 ntBASIC13.69□□□□□ -0.22
Col8a2P25318 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col8a2P25318 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col8a2P25318 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col8a2P25318 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col8a2P25318 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col8a2P25318 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col8a2P25318 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col8a2P25318 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col8a2P25318 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col8a2P25318 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.69□□□□□ -0.22
Col8a2P25318 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col8a2P25318 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col8a2P25318 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col8a2P25318 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col8a2P25318 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col8a2P25318 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col8a2P25318 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col8a2P25318 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col8a2P25318 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col8a2P25318 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col8a2P25318 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC13.68□□□□□ -0.22
Col8a2P25318 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col8a2P25318 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col8a2P25318 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col8a2P25318 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col8a2P25318 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.68□□□□□ -0.22
Col8a2P25318 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col8a2P25318 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.68□□□□□ -0.22
Col8a2P25318 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.68□□□□□ -0.22
Col8a2P25318 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.68□□□□□ -0.22
Col8a2P25318 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Col8a2P25318 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col8a2P25318 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col8a2P25318 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col8a2P25318 Gm7461-201ENSMUST00000058918 827 ntBASIC13.68□□□□□ -0.22
Col8a2P25318 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col8a2P25318 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Col8a2P25318 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col8a2P25318 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col8a2P25318 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col8a2P25318 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col8a2P25318 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC13.68□□□□□ -0.22
Col8a2P25318 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.68□□□□□ -0.22
Col8a2P25318 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Col8a2P25318 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col8a2P25318 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col8a2P25318 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.68□□□□□ -0.22
Col8a2P25318 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Col8a2P25318 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col8a2P25318 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Col8a2P25318 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col8a2P25318 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Col8a2P25318 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col8a2P25318 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col8a2P25318 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col8a2P25318 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.67□□□□□ -0.22
Col8a2P25318 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.67□□□□□ -0.22
Col8a2P25318 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col8a2P25318 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col8a2P25318 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.67□□□□□ -0.22
Col8a2P25318 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col8a2P25318 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col8a2P25318 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col8a2P25318 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col8a2P25318 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col8a2P25318 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col8a2P25318 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col8a2P25318 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col8a2P25318 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col8a2P25318 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col8a2P25318 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.67□□□□□ -0.22
Col8a2P25318 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col8a2P25318 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col8a2P25318 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col8a2P25318 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Col8a2P25318 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col8a2P25318 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col8a2P25318 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col8a2P25318 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col8a2P25318 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
Col8a2P25318 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col8a2P25318 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Col8a2P25318 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Col8a2P25318 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col8a2P25318 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col8a2P25318 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.66□□□□□ -0.22
Col8a2P25318 Gm24589-201ENSMUST00000116692 94 ntBASIC13.66□□□□□ -0.22
Col8a2P25318 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.66□□□□□ -0.22
Col8a2P25318 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col8a2P25318 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.66□□□□□ -0.22
Col8a2P25318 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col8a2P25318 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.66□□□□□ -0.22
Col8a2P25318 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col8a2P25318 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
Col8a2P25318 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col8a2P25318 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms