Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm27702-201ENSMUST00000184512 56 ntBASIC14.49□□□□□ -0.09
Ccl3P10855 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.49□□□□□ -0.09
Ccl3P10855 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl3P10855 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl3P10855 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl3P10855 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl3P10855 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl3P10855 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl3P10855 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl3P10855 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl3P10855 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl3P10855 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl3P10855 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl3P10855 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.49□□□□□ -0.09
Ccl3P10855 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl3P10855 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl3P10855 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.48□□□□□ -0.09
Ccl3P10855 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl3P10855 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ccl3P10855 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.48□□□□□ -0.09
Ccl3P10855 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl3P10855 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl3P10855 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.48□□□□□ -0.09
Ccl3P10855 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.48□□□□□ -0.09
Ccl3P10855 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Ccl3P10855 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ccl3P10855 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl3P10855 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl3P10855 Gm9172-201ENSMUST00000212092 954 ntBASIC14.48□□□□□ -0.09
Ccl3P10855 Gm8655-201ENSMUST00000221159 852 ntBASIC14.48□□□□□ -0.09
Ccl3P10855 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl3P10855 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl3P10855 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl3P10855 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl3P10855 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl3P10855 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ccl3P10855 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.48□□□□□ -0.09
Ccl3P10855 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Ccl3P10855 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl3P10855 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl3P10855 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl3P10855 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ccl3P10855 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl3P10855 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl3P10855 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl3P10855 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl3P10855 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl3P10855 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl3P10855 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl3P10855 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl3P10855 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl3P10855 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.47□□□□□ -0.09
Ccl3P10855 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl3P10855 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.47□□□□□ -0.09
Ccl3P10855 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.47□□□□□ -0.09
Ccl3P10855 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl3P10855 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ccl3P10855 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl3P10855 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl3P10855 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl3P10855 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.47□□□□□ -0.09
Ccl3P10855 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccl3P10855 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
Ccl3P10855 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl3P10855 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl3P10855 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl3P10855 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.46□□□□□ -0.09
Ccl3P10855 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl3P10855 Gm13036-201ENSMUST00000117799 748 ntBASIC14.46□□□□□ -0.09
Ccl3P10855 Gm14140-201ENSMUST00000119999 995 ntBASIC14.46□□□□□ -0.09
Ccl3P10855 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl3P10855 Gm36967-201ENSMUST00000193814 266 ntBASIC14.46□□□□□ -0.09
Ccl3P10855 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.46□□□□□ -0.09
Ccl3P10855 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl3P10855 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl3P10855 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl3P10855 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl3P10855 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ccl3P10855 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl3P10855 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl3P10855 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl3P10855 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccl3P10855 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccl3P10855 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ccl3P10855 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccl3P10855 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccl3P10855 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ccl3P10855 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccl3P10855 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccl3P10855 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.45□□□□□ -0.1
Ccl3P10855 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.45□□□□□ -0.1
Ccl3P10855 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ccl3P10855 Gm25406-201ENSMUST00000157599 105 ntBASIC14.45□□□□□ -0.1
Ccl3P10855 Gm6736-201ENSMUST00000166583 948 ntBASIC14.45□□□□□ -0.1
Ccl3P10855 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Ccl3P10855 Gm27628-201ENSMUST00000184911 107 ntBASIC14.45□□□□□ -0.1
Ccl3P10855 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccl3P10855 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ccl3P10855 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccl3P10855 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms