Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp6P0C0A3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp6P0C0A3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp6P0C0A3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp6P0C0A3 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp6P0C0A3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Phf7-203ENSMUST00000226565 1971 ntBASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chmp6P0C0A3 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp6P0C0A3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Chmp6P0C0A3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.85■□□□□ 0.45
Chmp6P0C0A3 Gm13216-201ENSMUST00000117145 591 ntBASIC17.85■□□□□ 0.45
Chmp6P0C0A3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp6P0C0A3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp6P0C0A3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp6P0C0A3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp6P0C0A3 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp6P0C0A3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp6P0C0A3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp6P0C0A3 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp6P0C0A3 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp6P0C0A3 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp6P0C0A3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp6P0C0A3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp6P0C0A3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp6P0C0A3 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp6P0C0A3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp6P0C0A3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp6P0C0A3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp6P0C0A3 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Chmp6P0C0A3 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chmp6P0C0A3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Chmp6P0C0A3 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp6P0C0A3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp6P0C0A3 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.84■□□□□ 0.45
Chmp6P0C0A3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Chmp6P0C0A3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp6P0C0A3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp6P0C0A3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp6P0C0A3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp6P0C0A3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp6P0C0A3 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp6P0C0A3 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp6P0C0A3 Gm11355-201ENSMUST00000121120 306 ntBASIC17.84■□□□□ 0.45
Chmp6P0C0A3 AA414768-201ENSMUST00000121924 1257 ntBASIC17.84■□□□□ 0.45
Chmp6P0C0A3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.84■□□□□ 0.45
Chmp6P0C0A3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.84■□□□□ 0.45
Chmp6P0C0A3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp6P0C0A3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.84■□□□□ 0.45
Chmp6P0C0A3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp6P0C0A3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Chmp6P0C0A3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp6P0C0A3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.84■□□□□ 0.45
Chmp6P0C0A3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp6P0C0A3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chmp6P0C0A3 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Chmp6P0C0A3 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chmp6P0C0A3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chmp6P0C0A3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chmp6P0C0A3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Chmp6P0C0A3 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms