Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a1P02463 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a1P02463 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a1P02463 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
Col4a1P02463 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC20.1■□□□□ 0.81
Col4a1P02463 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC20.1■□□□□ 0.81
Col4a1P02463 Gm8655-201ENSMUST00000221159 852 ntBASIC20.1■□□□□ 0.81
Col4a1P02463 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a1P02463 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a1P02463 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a1P02463 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a1P02463 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a1P02463 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a1P02463 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC20.1■□□□□ 0.81
Col4a1P02463 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Col4a1P02463 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a1P02463 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC20.1■□□□□ 0.81
Col4a1P02463 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a1P02463 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a1P02463 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a1P02463 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a1P02463 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a1P02463 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Col4a1P02463 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a1P02463 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a1P02463 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Col4a1P02463 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Col4a1P02463 Gm13597-201ENSMUST00000121239 375 ntBASIC20.09■□□□□ 0.81
Col4a1P02463 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a1P02463 AC090659.1-201ENSMUST00000224334 768 ntBASIC20.09■□□□□ 0.81
Col4a1P02463 AC147366.1-201ENSMUST00000227671 852 ntBASIC20.09■□□□□ 0.81
Col4a1P02463 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a1P02463 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a1P02463 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Col4a1P02463 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Col4a1P02463 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Col4a1P02463 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Col4a1P02463 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Col4a1P02463 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Col4a1P02463 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Col4a1P02463 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Col4a1P02463 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Col4a1P02463 Gm7222-201ENSMUST00000117512 906 ntBASIC20.07■□□□□ 0.8
Col4a1P02463 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC20.07■□□□□ 0.8
Col4a1P02463 AC225888.1-201ENSMUST00000227184 728 ntBASIC20.07■□□□□ 0.8
Col4a1P02463 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a1P02463 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Col4a1P02463 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a1P02463 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a1P02463 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a1P02463 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a1P02463 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a1P02463 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a1P02463 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Col4a1P02463 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a1P02463 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a1P02463 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.07■□□□□ 0.8
Col4a1P02463 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Col4a1P02463 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC20.07■□□□□ 0.8
Col4a1P02463 Gm18622-201ENSMUST00000219361 595 ntBASIC20.07■□□□□ 0.8
Col4a1P02463 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a1P02463 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a1P02463 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a1P02463 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a1P02463 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a1P02463 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a1P02463 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Col4a1P02463 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a1P02463 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a1P02463 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC20.06■□□□□ 0.8
Col4a1P02463 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a1P02463 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a1P02463 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.06■□□□□ 0.8
Col4a1P02463 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a1P02463 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a1P02463 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a1P02463 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a1P02463 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a1P02463 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Col4a1P02463 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a1P02463 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a1P02463 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a1P02463 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a1P02463 H2af-ps-201ENSMUST00000119066 295 ntBASIC20.05■□□□□ 0.8
Col4a1P02463 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC20.05■□□□□ 0.8
Col4a1P02463 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC20.05■□□□□ 0.8
Col4a1P02463 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a1P02463 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a1P02463 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a1P02463 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a1P02463 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a1P02463 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a1P02463 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a1P02463 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a1P02463 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a1P02463 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a1P02463 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC20.05■□□□□ 0.8
Col4a1P02463 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a1P02463 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a1P02463 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms