Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TcraP01849 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TcraP01849 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TcraP01849 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
TcraP01849 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TcraP01849 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
TcraP01849 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TcraP01849 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TcraP01849 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TcraP01849 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TcraP01849 Gm7290-201ENSMUST00000104990 617 ntBASIC12.03□□□□□ -0.48
TcraP01849 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TcraP01849 Gm12918-201ENSMUST00000120234 636 ntBASIC12.03□□□□□ -0.48
TcraP01849 Gm15710-201ENSMUST00000121821 636 ntBASIC12.03□□□□□ -0.48
TcraP01849 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
TcraP01849 Gm5075-201ENSMUST00000196916 622 ntBASIC12.03□□□□□ -0.48
TcraP01849 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC12.03□□□□□ -0.48
TcraP01849 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC12.03□□□□□ -0.48
TcraP01849 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
TcraP01849 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TcraP01849 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
TcraP01849 Gm13509-201ENSMUST00000119733 1308 ntBASIC12.03□□□□□ -0.48
TcraP01849 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TcraP01849 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TcraP01849 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TcraP01849 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TcraP01849 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TcraP01849 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TcraP01849 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
TcraP01849 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TcraP01849 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
TcraP01849 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
TcraP01849 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TcraP01849 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TcraP01849 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TcraP01849 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.02□□□□□ -0.48
TcraP01849 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
TcraP01849 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TcraP01849 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TcraP01849 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.48
TcraP01849 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TcraP01849 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TcraP01849 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TcraP01849 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
TcraP01849 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TcraP01849 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC12.02□□□□□ -0.49
TcraP01849 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.02□□□□□ -0.49
TcraP01849 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
TcraP01849 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC12.02□□□□□ -0.49
TcraP01849 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC12.02□□□□□ -0.49
TcraP01849 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TcraP01849 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TcraP01849 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
TcraP01849 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
TcraP01849 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC12.02□□□□□ -0.49
TcraP01849 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TcraP01849 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.02□□□□□ -0.49
TcraP01849 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.02□□□□□ -0.49
TcraP01849 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TcraP01849 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
TcraP01849 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TcraP01849 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TcraP01849 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.02□□□□□ -0.49
TcraP01849 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.02□□□□□ -0.49
TcraP01849 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
TcraP01849 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC12.02□□□□□ -0.49
TcraP01849 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TcraP01849 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TcraP01849 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TcraP01849 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TcraP01849 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TcraP01849 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TcraP01849 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TcraP01849 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TcraP01849 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TcraP01849 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
TcraP01849 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TcraP01849 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TcraP01849 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.01□□□□□ -0.49
TcraP01849 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TcraP01849 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TcraP01849 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.01□□□□□ -0.49
TcraP01849 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC12.01□□□□□ -0.49
TcraP01849 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
TcraP01849 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
TcraP01849 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TcraP01849 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TcraP01849 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TcraP01849 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TcraP01849 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TcraP01849 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
TcraP01849 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TcraP01849 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.01□□□□□ -0.49
TcraP01849 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.01□□□□□ -0.49
TcraP01849 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TcraP01849 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TcraP01849 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TcraP01849 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TcraP01849 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12□□□□□ -0.49
TcraP01849 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms