Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Igh-VJ558P01758 Dancr-204ENSMUST00000132389 2347 ntBASIC14.22□□□□□ -0.13
Igh-VJ558P01758 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igh-VJ558P01758 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Igh-VJ558P01758 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igh-VJ558P01758 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igh-VJ558P01758 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igh-VJ558P01758 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.22□□□□□ -0.13
Igh-VJ558P01758 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Igh-VJ558P01758 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Igh-VJ558P01758 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igh-VJ558P01758 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igh-VJ558P01758 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Igh-VJ558P01758 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Igh-VJ558P01758 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Igh-VJ558P01758 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.21□□□□□ -0.13
Igh-VJ558P01758 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.21□□□□□ -0.13
Igh-VJ558P01758 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igh-VJ558P01758 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Igh-VJ558P01758 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igh-VJ558P01758 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Igh-VJ558P01758 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Igh-VJ558P01758 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igh-VJ558P01758 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igh-VJ558P01758 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Igh-VJ558P01758 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igh-VJ558P01758 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igh-VJ558P01758 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igh-VJ558P01758 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.21□□□□□ -0.13
Igh-VJ558P01758 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Igh-VJ558P01758 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Igh-VJ558P01758 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.14
Igh-VJ558P01758 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Igh-VJ558P01758 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Igh-VJ558P01758 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igh-VJ558P01758 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Gm18101-201ENSMUST00000215769 548 ntBASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Igh-VJ558P01758 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igh-VJ558P01758 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igh-VJ558P01758 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igh-VJ558P01758 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms