Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syn1O88935 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Syn1O88935 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syn1O88935 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Syn1O88935 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syn1O88935 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Syn1O88935 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syn1O88935 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syn1O88935 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syn1O88935 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
Syn1O88935 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syn1O88935 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syn1O88935 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Syn1O88935 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Syn1O88935 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Syn1O88935 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.86■□□□□ 0.29
Syn1O88935 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.86■□□□□ 0.29
Syn1O88935 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.86■□□□□ 0.29
Syn1O88935 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.86■□□□□ 0.29
Syn1O88935 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syn1O88935 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syn1O88935 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.86■□□□□ 0.29
Syn1O88935 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syn1O88935 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syn1O88935 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Syn1O88935 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syn1O88935 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Syn1O88935 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Syn1O88935 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Syn1O88935 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Syn1O88935 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Syn1O88935 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Syn1O88935 Gm7222-201ENSMUST00000117512 906 ntBASIC16.85■□□□□ 0.29
Syn1O88935 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Syn1O88935 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.85■□□□□ 0.29
Syn1O88935 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.85■□□□□ 0.29
Syn1O88935 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.85■□□□□ 0.29
Syn1O88935 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.85■□□□□ 0.29
Syn1O88935 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Syn1O88935 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.85■□□□□ 0.29
Syn1O88935 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.85■□□□□ 0.29
Syn1O88935 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Syn1O88935 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Syn1O88935 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Syn1O88935 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Syn1O88935 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Syn1O88935 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Syn1O88935 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Syn1O88935 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Syn1O88935 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Syn1O88935 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Syn1O88935 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Syn1O88935 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.85■□□□□ 0.29
Syn1O88935 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.84■□□□□ 0.29
Syn1O88935 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Syn1O88935 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Syn1O88935 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Syn1O88935 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Syn1O88935 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Syn1O88935 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Syn1O88935 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Syn1O88935 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Syn1O88935 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Syn1O88935 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Syn1O88935 Gm11780-201ENSMUST00000136880 516 ntBASIC16.84■□□□□ 0.29
Syn1O88935 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.84■□□□□ 0.29
Syn1O88935 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Syn1O88935 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Syn1O88935 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.84■□□□□ 0.29
Syn1O88935 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Syn1O88935 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.84■□□□□ 0.29
Syn1O88935 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Syn1O88935 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
Syn1O88935 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Syn1O88935 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Syn1O88935 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.84■□□□□ 0.29
Syn1O88935 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.84■□□□□ 0.29
Syn1O88935 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Syn1O88935 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Syn1O88935 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Syn1O88935 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.84■□□□□ 0.29
Syn1O88935 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Syn1O88935 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Syn1O88935 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Syn1O88935 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Syn1O88935 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.83■□□□□ 0.28
Syn1O88935 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Syn1O88935 Gm5745-201ENSMUST00000183748 313 ntBASIC16.83■□□□□ 0.28
Syn1O88935 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Syn1O88935 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Syn1O88935 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Syn1O88935 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Syn1O88935 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Syn1O88935 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Syn1O88935 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Syn1O88935 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Syn1O88935 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Syn1O88935 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Syn1O88935 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Syn1O88935 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms