Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cops6O88545 Gm25990-201ENSMUST00000102440 86 ntBASIC19.99■□□□□ 0.79
Cops6O88545 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cops6O88545 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.99■□□□□ 0.79
Cops6O88545 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.99■□□□□ 0.79
Cops6O88545 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.99■□□□□ 0.79
Cops6O88545 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cops6O88545 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cops6O88545 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cops6O88545 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.99■□□□□ 0.79
Cops6O88545 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cops6O88545 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cops6O88545 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cops6O88545 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cops6O88545 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cops6O88545 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cops6O88545 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cops6O88545 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Cops6O88545 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cops6O88545 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cops6O88545 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cops6O88545 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cops6O88545 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC19.98■□□□□ 0.79
Cops6O88545 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.98■□□□□ 0.79
Cops6O88545 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Cops6O88545 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Cops6O88545 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cops6O88545 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Cops6O88545 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cops6O88545 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.98■□□□□ 0.79
Cops6O88545 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cops6O88545 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cops6O88545 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Cops6O88545 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cops6O88545 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cops6O88545 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cops6O88545 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.98■□□□□ 0.79
Cops6O88545 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Cops6O88545 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Cops6O88545 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cops6O88545 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.97■□□□□ 0.79
Cops6O88545 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cops6O88545 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.97■□□□□ 0.79
Cops6O88545 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.97■□□□□ 0.79
Cops6O88545 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cops6O88545 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cops6O88545 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cops6O88545 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cops6O88545 Gm4459-201ENSMUST00000118750 468 ntBASIC19.97■□□□□ 0.79
Cops6O88545 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.97■□□□□ 0.79
Cops6O88545 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cops6O88545 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Cops6O88545 Gm37584-201ENSMUST00000193595 1290 ntBASIC19.97■□□□□ 0.79
Cops6O88545 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cops6O88545 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Cops6O88545 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Cops6O88545 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cops6O88545 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Cops6O88545 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.97■□□□□ 0.79
Cops6O88545 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cops6O88545 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Cops6O88545 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cops6O88545 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Cops6O88545 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.97■□□□□ 0.79
Cops6O88545 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cops6O88545 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cops6O88545 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cops6O88545 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cops6O88545 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cops6O88545 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cops6O88545 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cops6O88545 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.96■□□□□ 0.79
Cops6O88545 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.96■□□□□ 0.79
Cops6O88545 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.96■□□□□ 0.79
Cops6O88545 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cops6O88545 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.96■□□□□ 0.79
Cops6O88545 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.96■□□□□ 0.79
Cops6O88545 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.96■□□□□ 0.79
Cops6O88545 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cops6O88545 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Cops6O88545 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cops6O88545 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
Cops6O88545 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Cops6O88545 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cops6O88545 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cops6O88545 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cops6O88545 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cops6O88545 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cops6O88545 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Cops6O88545 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
Cops6O88545 Gm12497-201ENSMUST00000138778 237 ntBASIC19.95■□□□□ 0.78
Cops6O88545 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC19.95■□□□□ 0.78
Cops6O88545 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cops6O88545 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC19.95■□□□□ 0.78
Cops6O88545 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.95■□□□□ 0.78
Cops6O88545 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cops6O88545 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cops6O88545 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cops6O88545 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Cops6O88545 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms