Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.93■□□□□ 0.14
Cacna1hO88427 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Cacna1hO88427 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cacna1hO88427 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.93■□□□□ 0.14
Cacna1hO88427 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Cacna1hO88427 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Cacna1hO88427 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1hO88427 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.92■□□□□ 0.14
Cacna1hO88427 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1hO88427 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1hO88427 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1hO88427 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1hO88427 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1hO88427 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.92■□□□□ 0.14
Cacna1hO88427 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
Cacna1hO88427 Gm18889-201ENSMUST00000174284 929 ntBASIC15.92■□□□□ 0.14
Cacna1hO88427 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1hO88427 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.92■□□□□ 0.14
Cacna1hO88427 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1hO88427 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1hO88427 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1hO88427 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1hO88427 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1hO88427 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1hO88427 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Cacna1hO88427 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1hO88427 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1hO88427 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1hO88427 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1hO88427 Gm12490-201ENSMUST00000120255 560 ntBASIC15.92■□□□□ 0.14
Cacna1hO88427 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Cacna1hO88427 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1hO88427 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.92■□□□□ 0.14
Cacna1hO88427 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1hO88427 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1hO88427 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1hO88427 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1hO88427 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.92■□□□□ 0.14
Cacna1hO88427 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
Cacna1hO88427 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cacna1hO88427 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cacna1hO88427 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cacna1hO88427 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Cacna1hO88427 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cacna1hO88427 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.91■□□□□ 0.14
Cacna1hO88427 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cacna1hO88427 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cacna1hO88427 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cacna1hO88427 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cacna1hO88427 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cacna1hO88427 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Cacna1hO88427 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cacna1hO88427 Gm13223-201ENSMUST00000118609 747 ntBASIC15.91■□□□□ 0.14
Cacna1hO88427 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cacna1hO88427 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.91■□□□□ 0.14
Cacna1hO88427 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.91■□□□□ 0.14
Cacna1hO88427 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cacna1hO88427 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.91■□□□□ 0.14
Cacna1hO88427 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cacna1hO88427 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cacna1hO88427 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cacna1hO88427 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cacna1hO88427 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cacna1hO88427 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.9■□□□□ 0.14
Cacna1hO88427 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Cacna1hO88427 Gm7774-201ENSMUST00000200064 533 ntBASIC15.9■□□□□ 0.14
Cacna1hO88427 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.9■□□□□ 0.14
Cacna1hO88427 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cacna1hO88427 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cacna1hO88427 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cacna1hO88427 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cacna1hO88427 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cacna1hO88427 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cacna1hO88427 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cacna1hO88427 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Cacna1hO88427 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.9■□□□□ 0.14
Cacna1hO88427 Gm43433-201ENSMUST00000196573 481 ntBASIC15.9■□□□□ 0.14
Cacna1hO88427 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cacna1hO88427 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Cacna1hO88427 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cacna1hO88427 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cacna1hO88427 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.89■□□□□ 0.14
Cacna1hO88427 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
Cacna1hO88427 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.89■□□□□ 0.13
Cacna1hO88427 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1hO88427 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.89■□□□□ 0.13
Cacna1hO88427 Hsf1-207ENSMUST00000228371 2102 ntBASIC15.89■□□□□ 0.13
Cacna1hO88427 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1hO88427 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1hO88427 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1hO88427 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1hO88427 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1hO88427 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1hO88427 Gm9794-201ENSMUST00000202370 423 ntBASIC15.89■□□□□ 0.13
Cacna1hO88427 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.89■□□□□ 0.13
Cacna1hO88427 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1hO88427 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1hO88427 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1hO88427 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.89■□□□□ 0.13
Cacna1hO88427 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms