Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Vti1bO88384 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.67■□□□□ 0.1
Vti1bO88384 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.67■□□□□ 0.1
Vti1bO88384 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.67■□□□□ 0.1
Vti1bO88384 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vti1bO88384 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vti1bO88384 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vti1bO88384 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vti1bO88384 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vti1bO88384 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vti1bO88384 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vti1bO88384 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vti1bO88384 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vti1bO88384 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vti1bO88384 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Vti1bO88384 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vti1bO88384 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vti1bO88384 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vti1bO88384 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vti1bO88384 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vti1bO88384 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.66■□□□□ 0.1
Vti1bO88384 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vti1bO88384 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vti1bO88384 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Vti1bO88384 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.66■□□□□ 0.1
Vti1bO88384 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.66■□□□□ 0.1
Vti1bO88384 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vti1bO88384 Gm9731-201ENSMUST00000209480 747 ntBASIC15.66■□□□□ 0.1
Vti1bO88384 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vti1bO88384 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Vti1bO88384 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vti1bO88384 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vti1bO88384 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Vti1bO88384 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vti1bO88384 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Vti1bO88384 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vti1bO88384 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vti1bO88384 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vti1bO88384 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vti1bO88384 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1bO88384 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1bO88384 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1bO88384 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Vti1bO88384 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1bO88384 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1bO88384 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1bO88384 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1bO88384 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1bO88384 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Vti1bO88384 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1bO88384 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1bO88384 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1bO88384 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1bO88384 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1bO88384 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1bO88384 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1bO88384 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1bO88384 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1bO88384 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.65■□□□□ 0.1
Vti1bO88384 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1bO88384 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1bO88384 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1bO88384 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1bO88384 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1bO88384 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1bO88384 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1bO88384 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1bO88384 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1bO88384 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1bO88384 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.65■□□□□ 0.1
Vti1bO88384 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vti1bO88384 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1bO88384 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1bO88384 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1bO88384 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.64■□□□□ 0.09
Vti1bO88384 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.64■□□□□ 0.09
Vti1bO88384 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Vti1bO88384 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1bO88384 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.64■□□□□ 0.09
Vti1bO88384 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1bO88384 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.64■□□□□ 0.09
Vti1bO88384 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.64■□□□□ 0.09
Vti1bO88384 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1bO88384 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1bO88384 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1bO88384 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.64■□□□□ 0.09
Vti1bO88384 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1bO88384 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1bO88384 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Vti1bO88384 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.64■□□□□ 0.09
Vti1bO88384 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Vti1bO88384 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1bO88384 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1bO88384 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vti1bO88384 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.63■□□□□ 0.09
Vti1bO88384 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vti1bO88384 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Vti1bO88384 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Vti1bO88384 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vti1bO88384 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms