Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nid2O88322 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Nid2O88322 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nid2O88322 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Nid2O88322 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nid2O88322 Gm14701-201ENSMUST00000117156 348 ntBASIC21.27■■□□□ 1
Nid2O88322 Gm14057-201ENSMUST00000120631 482 ntBASIC21.27■■□□□ 1
Nid2O88322 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC21.27■■□□□ 1
Nid2O88322 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nid2O88322 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nid2O88322 Gm27300-201ENSMUST00000184085 97 ntBASIC21.27■■□□□ 1
Nid2O88322 Gm27335-201ENSMUST00000184758 97 ntBASIC21.27■■□□□ 1
Nid2O88322 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC21.27■■□□□ 1
Nid2O88322 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nid2O88322 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC21.27■□□□□ 0.99
Nid2O88322 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nid2O88322 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nid2O88322 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nid2O88322 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nid2O88322 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nid2O88322 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nid2O88322 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nid2O88322 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nid2O88322 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC21.26■□□□□ 0.99
Nid2O88322 AC159114.1-201ENSMUST00000220349 266 ntBASIC21.26■□□□□ 0.99
Nid2O88322 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Nid2O88322 AC159295.1-201ENSMUST00000225326 940 ntBASIC21.26■□□□□ 0.99
Nid2O88322 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nid2O88322 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nid2O88322 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nid2O88322 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nid2O88322 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nid2O88322 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nid2O88322 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
Nid2O88322 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nid2O88322 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC21.25■□□□□ 0.99
Nid2O88322 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nid2O88322 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Nid2O88322 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nid2O88322 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nid2O88322 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Nid2O88322 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nid2O88322 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nid2O88322 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nid2O88322 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nid2O88322 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nid2O88322 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nid2O88322 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC21.24■□□□□ 0.99
Nid2O88322 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC21.24■□□□□ 0.99
Nid2O88322 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Nid2O88322 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nid2O88322 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC21.24■□□□□ 0.99
Nid2O88322 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Nid2O88322 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Nid2O88322 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nid2O88322 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nid2O88322 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nid2O88322 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nid2O88322 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC21.24■□□□□ 0.99
Nid2O88322 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nid2O88322 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nid2O88322 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nid2O88322 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nid2O88322 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Nid2O88322 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nid2O88322 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nid2O88322 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC21.23■□□□□ 0.99
Nid2O88322 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nid2O88322 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC21.23■□□□□ 0.99
Nid2O88322 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nid2O88322 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.23■□□□□ 0.99
Nid2O88322 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nid2O88322 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nid2O88322 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nid2O88322 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nid2O88322 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nid2O88322 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nid2O88322 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Nid2O88322 Gm4899-201ENSMUST00000178708 719 ntBASIC21.22■□□□□ 0.99
Nid2O88322 Gm45167-201ENSMUST00000208007 322 ntBASIC21.22■□□□□ 0.99
Nid2O88322 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC21.22■□□□□ 0.99
Nid2O88322 Gm8396-201ENSMUST00000057361 823 ntBASIC21.22■□□□□ 0.99
Nid2O88322 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nid2O88322 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nid2O88322 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Nid2O88322 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nid2O88322 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nid2O88322 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
Nid2O88322 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nid2O88322 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nid2O88322 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nid2O88322 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Nid2O88322 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nid2O88322 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC21.21■□□□□ 0.99
Nid2O88322 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nid2O88322 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nid2O88322 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
Nid2O88322 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nid2O88322 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Nid2O88322 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms