Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Pdlim3O70209 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim3O70209 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim3O70209 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Pdlim3O70209 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim3O70209 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Pdlim3O70209 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim3O70209 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim3O70209 Gm12085-201ENSMUST00000119263 940 ntBASIC14.91□□□□□ -0.02
Pdlim3O70209 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.91□□□□□ -0.02
Pdlim3O70209 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.91□□□□□ -0.02
Pdlim3O70209 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Pdlim3O70209 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim3O70209 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.91□□□□□ -0.02
Pdlim3O70209 Il3ra-202ENSMUST00000223589 738 ntBASIC14.91□□□□□ -0.02
Pdlim3O70209 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim3O70209 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim3O70209 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim3O70209 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.91□□□□□ -0.02
Pdlim3O70209 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim3O70209 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.9□□□□□ -0.02
Pdlim3O70209 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim3O70209 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim3O70209 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.9□□□□□ -0.02
Pdlim3O70209 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim3O70209 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim3O70209 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Pdlim3O70209 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim3O70209 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim3O70209 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim3O70209 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim3O70209 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pdlim3O70209 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pdlim3O70209 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Pdlim3O70209 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim3O70209 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim3O70209 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.9□□□□□ -0.02
Pdlim3O70209 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.9□□□□□ -0.02
Pdlim3O70209 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.9□□□□□ -0.02
Pdlim3O70209 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.9□□□□□ -0.02
Pdlim3O70209 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim3O70209 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim3O70209 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim3O70209 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim3O70209 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim3O70209 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim3O70209 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim3O70209 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim3O70209 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim3O70209 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pdlim3O70209 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim3O70209 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim3O70209 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim3O70209 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim3O70209 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pdlim3O70209 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.89□□□□□ -0.03
Pdlim3O70209 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim3O70209 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.89□□□□□ -0.03
Pdlim3O70209 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim3O70209 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim3O70209 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim3O70209 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim3O70209 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim3O70209 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim3O70209 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim3O70209 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim3O70209 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim3O70209 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim3O70209 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim3O70209 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Pdlim3O70209 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim3O70209 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim3O70209 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim3O70209 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim3O70209 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Pdlim3O70209 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim3O70209 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim3O70209 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim3O70209 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.88□□□□□ -0.03
Pdlim3O70209 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pdlim3O70209 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim3O70209 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim3O70209 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Pdlim3O70209 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.88□□□□□ -0.03
Pdlim3O70209 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim3O70209 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim3O70209 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim3O70209 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim3O70209 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim3O70209 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim3O70209 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim3O70209 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pdlim3O70209 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pdlim3O70209 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Pdlim3O70209 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim3O70209 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.88□□□□□ -0.03
Pdlim3O70209 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim3O70209 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim3O70209 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Pdlim3O70209 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms