Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Alx3O70137 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Alx3O70137 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.92□□□□□ -0.02
Alx3O70137 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Alx3O70137 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Alx3O70137 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Alx3O70137 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Alx3O70137 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Alx3O70137 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Alx3O70137 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.92□□□□□ -0.02
Alx3O70137 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Alx3O70137 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.92□□□□□ -0.02
Alx3O70137 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Alx3O70137 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Alx3O70137 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Alx3O70137 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Alx3O70137 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Alx3O70137 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Alx3O70137 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Alx3O70137 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
Alx3O70137 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx3O70137 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx3O70137 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Alx3O70137 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx3O70137 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx3O70137 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.91□□□□□ -0.02
Alx3O70137 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Alx3O70137 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx3O70137 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.91□□□□□ -0.02
Alx3O70137 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Alx3O70137 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Alx3O70137 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx3O70137 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.91□□□□□ -0.02
Alx3O70137 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Alx3O70137 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx3O70137 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx3O70137 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx3O70137 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx3O70137 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx3O70137 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx3O70137 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx3O70137 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Alx3O70137 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx3O70137 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
Alx3O70137 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx3O70137 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Alx3O70137 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Alx3O70137 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.91□□□□□ -0.02
Alx3O70137 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx3O70137 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Alx3O70137 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Alx3O70137 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Alx3O70137 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.9□□□□□ -0.02
Alx3O70137 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx3O70137 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Alx3O70137 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Alx3O70137 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Alx3O70137 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Alx3O70137 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Alx3O70137 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.9□□□□□ -0.02
Alx3O70137 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.9□□□□□ -0.02
Alx3O70137 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx3O70137 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx3O70137 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx3O70137 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Alx3O70137 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx3O70137 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx3O70137 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx3O70137 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx3O70137 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.9□□□□□ -0.02
Alx3O70137 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx3O70137 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx3O70137 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Alx3O70137 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx3O70137 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Alx3O70137 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Alx3O70137 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Alx3O70137 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Alx3O70137 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx3O70137 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx3O70137 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx3O70137 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx3O70137 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx3O70137 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.89□□□□□ -0.03
Alx3O70137 Gm18958-201ENSMUST00000174258 762 ntBASIC14.89□□□□□ -0.03
Alx3O70137 Gm27463-201ENSMUST00000183569 57 ntBASIC14.89□□□□□ -0.03
Alx3O70137 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx3O70137 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx3O70137 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Alx3O70137 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx3O70137 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx3O70137 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx3O70137 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Alx3O70137 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx3O70137 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx3O70137 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx3O70137 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx3O70137 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx3O70137 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Alx3O70137 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms