Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pja1O55176 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pja1O55176 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pja1O55176 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pja1O55176 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pja1O55176 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pja1O55176 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.34■□□□□ 0.37
Pja1O55176 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pja1O55176 Gm13168-201ENSMUST00000121771 632 ntBASIC17.34■□□□□ 0.37
Pja1O55176 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pja1O55176 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pja1O55176 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.34■□□□□ 0.37
Pja1O55176 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pja1O55176 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pja1O55176 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pja1O55176 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.34■□□□□ 0.37
Pja1O55176 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pja1O55176 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pja1O55176 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pja1O55176 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Pja1O55176 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.33■□□□□ 0.37
Pja1O55176 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pja1O55176 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pja1O55176 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pja1O55176 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pja1O55176 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Pja1O55176 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.33■□□□□ 0.37
Pja1O55176 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pja1O55176 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pja1O55176 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.33■□□□□ 0.36
Pja1O55176 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.33■□□□□ 0.36
Pja1O55176 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.33■□□□□ 0.36
Pja1O55176 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pja1O55176 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.33■□□□□ 0.36
Pja1O55176 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pja1O55176 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pja1O55176 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pja1O55176 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Pja1O55176 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Pja1O55176 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
Pja1O55176 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.33■□□□□ 0.36
Pja1O55176 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.32■□□□□ 0.36
Pja1O55176 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.32■□□□□ 0.36
Pja1O55176 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.32■□□□□ 0.36
Pja1O55176 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pja1O55176 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pja1O55176 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Pja1O55176 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pja1O55176 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pja1O55176 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.32■□□□□ 0.36
Pja1O55176 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.32■□□□□ 0.36
Pja1O55176 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.32■□□□□ 0.36
Pja1O55176 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Pja1O55176 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pja1O55176 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pja1O55176 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pja1O55176 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pja1O55176 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pja1O55176 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pja1O55176 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pja1O55176 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pja1O55176 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.31■□□□□ 0.36
Pja1O55176 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pja1O55176 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pja1O55176 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.31■□□□□ 0.36
Pja1O55176 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pja1O55176 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pja1O55176 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pja1O55176 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pja1O55176 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pja1O55176 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pja1O55176 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pja1O55176 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pja1O55176 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pja1O55176 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.31■□□□□ 0.36
Pja1O55176 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pja1O55176 Gm44450-201ENSMUST00000199528 114 ntBASIC17.31■□□□□ 0.36
Pja1O55176 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.31■□□□□ 0.36
Pja1O55176 Gm18115-201ENSMUST00000221209 621 ntBASIC17.31■□□□□ 0.36
Pja1O55176 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pja1O55176 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.31■□□□□ 0.36
Pja1O55176 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Pja1O55176 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pja1O55176 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pja1O55176 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pja1O55176 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pja1O55176 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pja1O55176 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pja1O55176 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pja1O55176 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Pja1O55176 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pja1O55176 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pja1O55176 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pja1O55176 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pja1O55176 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pja1O55176 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.3■□□□□ 0.36
Pja1O55176 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.3■□□□□ 0.36
Pja1O55176 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pja1O55176 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.3■□□□□ 0.36
Pja1O55176 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms